G35967


Basic Information

Item Value
gene id G35967
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 4478950 ~ 4506202 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU48193
TACAGCCACTccagccagtcccacaatgagctttccttaggatgtgccatttctgtgtctgtagctattgaggaggagcaagggggggcaaggtggagggtgggggtgtggccttgaccaactgccactttgctcgtttgaaagccatgatgtctctctctcatgggtgggccaaattctctgggtgggcaaagcagagaaacctttccccttatgacctcataaagagaagattccaggtcggcccatctgagctttcattttctcaaaggcagatcAGGATAcacagggctcggtttacacctatcaccatttctagccactgggggaccataggcaggctggaggaactcatattaatattaaaaaacctcataaagtgaaattttcatagcatgggacctttaaagcgcagcagctgctctgcccggtgcgctCCATACACATGTTGAAGGGGGCTTTTTGCGTTGTATCTGGTGCTGAGAGGCACtgcccaagcgtccgtattttacgagttaggagtgagaacgggttgtcaaaacacacaacaccatTTAACTTGTGTTAATGTAGATGCATTGATTTGGTTTTTCTAATGTTGCAACTGTCAGTGACTCCCTACAGGCAGGCGTGGCAGGCAGACGTAGGCCTGGGCAAACAGGTTGATGTTCAGCGGGTTGCCATCCAGACGGATATCCTCCAGGTTACGGCGGATGAAGTTGAGATCATGACTGTTACAAAAGGTGTCCTCGTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU48193 True 755 lncRNA 0.50 2 4478950 4506202

Neighbor

gene id symbol gene type direction distance location
acad9 acad9 coding downstream 539541 3914049 ~ 3939409 (-)
efcc1 efcc1 coding downstream 588260 3865514 ~ 3890690 (-)
ap5b1 NA coding downstream 673885 3797651 ~ 3805065 (-)
p3h1 p3h1 coding downstream 724686 3729024 ~ 3754264 (-)
cldn19 cldn19 coding downstream 784242 3670690 ~ 3694708 (-)
LOC120556788 LOC105888650,LOC101068541,LOC103395674,LOC107388332,LOC105896821 coding upstream 29309 4535511 ~ 4537113 (-)
LOC120557501 NA coding upstream 58074 4564276 ~ 4564891 (-)
LOC120557504 si:ch1073-153i20.5,si:dkey-261m9.15,LOC103462478,LOC107386469,LOC102204254,LOC103381127,LOC103379246 coding upstream 62810 4569012 ~ 4569796 (-)
LOC120556673 LOC100698470,LOC102194894,LOC101473847,LOC102310675,LOC104957620,LOC102787480 coding upstream 99470 4605672 ~ 4613079 (-)
LOC120557988 NA coding upstream 109787 4615989 ~ 4663847 (-)
G35918 NA non-coding downstream 8767 4469978 ~ 4470183 (-)
G35875 hdac11 non-coding downstream 232903 4237593 ~ 4246047 (-)
G35857 NA non-coding downstream 502899 3975154 ~ 3976051 (-)
G35789 NA non-coding downstream 613621 3864156 ~ 3865329 (-)
G35768 NA non-coding downstream 705196 3773216 ~ 3773754 (-)
G35975 NA non-coding upstream 4395 4510597 ~ 4513050 (-)
G36059 NA non-coding upstream 293778 4799980 ~ 4802295 (-)
G36061 NA non-coding upstream 317310 4823512 ~ 4823804 (-)
G36087 NA non-coding upstream 396712 4902914 ~ 4913676 (-)
G36098 NA non-coding upstream 510715 5016917 ~ 5050291 (-)
apobec2a apobec2,LOC100696148,LOC102293474,LOC101160551,LOC102785934,LOC101475259 other downstream 56572 4406456 ~ 4422378 (-)
iqsec1b iqsec1,LOC101485759,LOC104921976 other downstream 288218 3944224 ~ 4190732 (-)
cfap57 NA other downstream 616523 3832108 ~ 3862427 (-)
nucks1a nucks1 other downstream 1051717 3244233 ~ 3427233 (-)
cdk18 cdk18,LOC101468598,LOC102310375 other downstream 1272187 3115239 ~ 3206763 (-)
LOC120556780 LOC106958509,LOC106963510,LOC107690788,LOC107671222,LOC107579420 other upstream 97916 4604118 ~ 4604494 (-)
ghrh ghrh,LOC108251004 other upstream 400157 4906359 ~ 4914157 (-)
LOC120558193 camkv,LOC102778568 other upstream 2441873 6948075 ~ 6996717 (-)
mbd1b NA other upstream 2641789 7147991 ~ 7161998 (-)
si:dkeyp-97e7.9 LOC103365916,LOC104945761 other upstream 2823264 7329466 ~ 7334361 (-)

Expression


Co-expression Network