G36025 (LOC107550338,LOC103365918,LOC104947949,LOC106955159)


Basic Information

Item Value
gene id G36025
gene name LOC107550338,LOC103365918,LOC104947949,LOC106955159
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 4805045 ~ 4809978 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU48277
tttttagatttttttggggcttttccgtcTTTAATTTGAcaagctaggtgagaaaggggagagagagagggggggaagacatgcaggaaatcgtcacaggtcagattagaaccctggacctctgcatcgaggcataaacctctcagtatatgcgcgcttgctctacccactgagccaacccggccacaaaaGGCCAGTATTTTTGTCCTAAAAACACCAGAGACTGTTTGTTAGCTACCTTGTCAGCAGCGGACAGTCTGGTCCAGGGCTTGTCAGCTCTCCTGTCGTAGTCCTGAGCTTTGGCCACTTCCACATAGTCACTAAAACGAATGAGGATCTTTCTGTCCCGCAGCTCGTCCACTGTCGGCCGCTGGTTCAGCTTTCTGTTCAGCCGCTGTTTGatttccctcctctcctcctgttcTGTCTGGTCATTTCTTTGCTTTAAAATGTTCCGACTCTCCAGCTCCTCCACGGCCGGCCTCTGGCTCAGTCTCCTGCGGAAAAACACCAGAATTACGTTCTGGACCATCTTTAAGTCCTCGCGCTGCTGGGCTTTCTTTCCtcaacccccacccaccccccaaaCCCCCCTCGGCACAAAGTCTTTTCACTCCTTCCACTTCTAGTACTAGCACTTCGGATGCTTGGGCCGGTGTGCAGAGCGCCAAGATCCAGATCCGCACATCCAAAAGGCAAACACCGCGTCCCACCTCGAGTCCGAAAAGCGGCTTGTTTTAGTAGAAGAACATTTAAGGCTCCACATCgggacaaacaaacagaaaaaagtcAGGCTGCGCGTTCGATGTCACGCGTCAGAGCCAGTTCAGTGAAGGGAAACGGGGAGACTTTCAAAAGAGCGGCTCGGTTCCGATGAGAAGGGCCGTTCAGAGAGAGCCGCGTTGGTCGTAGTCCCGGCGGAGCTGCGGAGGATGCGGAGCG

Function

NR:

description
PREDICTED: phosphatase and actin regulator 3-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU48277 True 942 lncRNA 0.53 3 4805045 4809978

Neighbor

gene id symbol gene type direction distance location
ppp1r3db LOC104967763 coding upstream 7785 4793581 ~ 4797260 (+)
LOC120557706 LOC104933218,LOC100705047,LOC101475466 coding upstream 37353 4745444 ~ 4767692 (+)
txnrd3 LOC103366329,LOC102309132,LOC105934676 coding upstream 75418 4708681 ~ 4729627 (+)
LOC120558218 NA coding upstream 120701 4681878 ~ 4684344 (+)
LOC120557508 NA coding upstream 219688 4584329 ~ 4585357 (+)
acot8 acot8,LOC102785802 coding downstream 59736 4869714 ~ 4875274 (+)
ift52 ift52,LOC102785231 coding downstream 65405 4875383 ~ 4879610 (+)
mybl2b mybl2 coding downstream 71228 4881206 ~ 4892779 (+)
rpn2 rpn2,LOC102784465 coding downstream 83471 4893449 ~ 4903690 (+)
LOC120556975 LOC103365933,LOC100695288,LOC105934533 coding downstream 146373 4956351 ~ 5043477 (+)
G36022 NA non-coding upstream 4061 4799971 ~ 4800984 (+)
G35958 NA non-coding upstream 110480 4691055 ~ 4694565 (+)
G35942 NA non-coding upstream 187648 4615893 ~ 4617397 (+)
G35941 NA non-coding upstream 192041 4610538 ~ 4613004 (+)
G35925 LOC104957620,LOC100698470,LOC102194894,LOC101473847,LOC102310675,LOC102787480 non-coding upstream 194985 4605460 ~ 4610060 (+)
G36034 NA non-coding downstream 39776 4849754 ~ 4850038 (+)
G36035 NA non-coding downstream 41276 4851254 ~ 4880394 (+)
G36044 NA non-coding downstream 127984 4937962 ~ 4940271 (+)
G36051 NA non-coding downstream 207674 5017652 ~ 5018636 (+)
G36054 NA non-coding downstream 244453 5054431 ~ 5054972 (+)
G35921 NA other upstream 219570 4487535 ~ 4585475 (+)
LOC120557928 NA other upstream 272183 4529833 ~ 4532862 (+)
G35791 LOC101072424,LOC104921976 other upstream 854917 3948834 ~ 3950128 (+)
epha8 epha8,LOC102791453 other upstream 1215433 3453600 ~ 3589612 (+)
G35618 NA other upstream 1446225 3244231 ~ 3358820 (+)
cdk5rap1 cdk5rap1 other downstream 101721 4911699 ~ 4934164 (+)
G36156 LOC103374102 other downstream 1110946 5920924 ~ 5924400 (+)
rybpb rybp other downstream 1225094 6035072 ~ 6055216 (+)
prok2 prok2,LOC103355444 other downstream 1294635 6104613 ~ 6107152 (+)
foxp1b foxp1 other downstream 1329485 6139463 ~ 6306143 (+)

Expression


Co-expression Network