G37342


Basic Information

Item Value
gene id G37342
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 10554032 ~ 10559006 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU50106
TCTAGACTGTGCTTTATTATTGGGCTAAGCTGAGACgcatcattcatttaaaattacaaaaaaagagtTCAGGGGACCATAGAATGGTGCAGTCTGGAGAGACAGGGACGGGAGCCTAAAGCGCACTGCCCAATCAGAAGCTTAGCTCATCAGGAACCCGGCAAAGCTTAATATGCAACATTCATTTCCCCACCCTCCATATGTGCTGAAATTGGGAAATAGATTTCCAGAATACTTTGAAAACCATATGAGGGAAAATGTGATTCTAGCAACACTACTGAgctttagaaataaaactacTAACAACAGCACTGAAAAGAAGCATAGTAACTCAATTGTTTTTGATGAGATAGTGCagttttcattgaattttgctCTTGGTAGAACACATCAGTTGAACAAGATCAGAGCTCTGTCAAACAATACAAAGCAAGATTGGATAAACAGGAGAAGGGGAATAAAGTTTTAGAAATCCAAAATGGTGTTTTATGCAGGCAGTTTAGCAATTCGTCAGACATTAGCTCCTTACACATTAGCAGCAACATATAGTGACCTCAAGGCATATCTTATGTTGTGATTACATATCTGACTGAACAGTTGGTTTATGAGGGAGTGGTTAACTAGGAATTGcccctttttttcactttgattTAAGGTTTCACAATATAAGCAAATGGTATTCAAAATGACAGACAAACCTCCAAttggcatctttttttttttttttttaacaatcttTACCTAAGCTAACATTTTGGAACAGAACAATAGGATTTTATAATAACAAATATACATAAGGCTTTAGTAGTGTACTGCATTGTTTTGAATAGTTTATCAGCAACAGGAAAATGTAAAATCAGTCTTTGAAGTTGTTAAATTCAGAGTTCGCCAATACGTCCAAGTGGTGTTATGTGATGTAGTGATACAAAGTAGCACTGACAAGCAAATCGATCAGTGGCAATAAGAGCTCAGATCTTGAATCAAACAGCacgaataaataaatacttaactacaaataaataaataaataaagacataaataaatgattaaaaatatGTCTTTGACATCACTTGGTCAGTAGGAGCATTTTTCCACATCATCAAAGAAGTGCTGAAGGCATGGTCCTGCAGACAGGAATAATGATCATCTGTGGACCACAACAGTGGCCCATGCATgtcatataaaaactatttGGTCACATACCAACTCATAGAAAAATAATGCCATGAAAGCATGCATATTATTTCAGACATGACTTATAAATTAATATCTAAACAAATAGATAAGTGAATAGAACCCatcaaagtattttttatttttataaaataggTCAATGTGTGTCTAAGCTCTAACTGAGGTCAATGCTCTCCCTGACTGTATTCTGGATAAATGCCTTGGTCAGGTCCTAGAGTTTGTACTGTATCCTAatgactattttttatttatttttttgtacctGGTTTTATTGAGCATTATCATGTTTTCATtcgtatattttttttttaaagaattaaagTACTTTATCCAGTCCTTGTAGATAGAAGTAAAAGTCCTATAAAATATGCAAACCTATGTACAGAGGAAAACggagcaaaaaaagaaacaatttacagtatattcatcggtttatgtatatatttatatatatatatttatattcaaacTTCTGCTctgtttcttgttgtttttgaaCCACAATACTTTGTTTTACTTTTCTTATGTAAACTTGCAGCTTCAAGTTGGAGCAAATGAAGAAGAGGTGCTTGGCATTCTAGTTCCCGTGGTCGTTCTGCTTCCCCTCCCTCATTTCACTCGACATTAAAACATGGGCTAGGTGAAAGACATGAGTGATTGCTCAAACAAACcgttaaaaaaaagcacaggCCGCATCAACACCTTTTTCAATTTTCTCAGAGCAGCGAGGGGCAGTCGAAGAGGGCACACAGTGTGGCGATCAGGGACACCAGACATGACATTTAGCTTCAGATGTTATTGTTAGCTCAAAGGCAGCTCAGGTGGATGTACCAGACGTTTTTGTACCTAACCAACCACGGATACTGTCAGAGCAAAAAAATGATCATGATGGTCATCTGGTTTGCACTGTACGCCACAGTCAGGCCATCGTTATGTGGCACATAGAAAGAGTGGCGTCCTGGGATGTGTGGTGGCGTCTTTTAGCCTCGCAAGATTTGGAAGGTAAATGTTAAATTATTCAATCTGCTAAAAAGGTTAGACACAGACACTAGGGAAATGGCATAATTAGCAGTGTATAGGAAAAACTAGTAACATCACCCAACAGGAAGCATTGTCTTCCAAAGTGTCATATAGCCTTataaatattcatatatataaatattcatTGAGTAATCTTCACCCGCTGAATATGTGTTGAATGCAGGGTCCAATAAATCCAAGTCTGTTGACCTTTTGCAGGTATATAGTAGGTGTCCATACCATTTTTGTAGACTATTATGAGAAACTGTATGCTAAAGCAATATGAAACCAGCCTCAGTGATACAGCAGTTGTGATGGGTAAATGGCTTTTCACTCTTATTGCTTCATTTTACAGTTTCATTATGCTTTTATGTGTATATTTGATTGTATGAGGGCATATAACATAAGGCAATATAACATCTTCTAAAGGATATGCTTCATGTCAAGTATTACCAGCAGAGATCCACACAGTAACTGCTGGATGGGGAAAGTACATAAAACCTCCCTTATTCTGTTCAGTGGGAAGCCAGCTCTCTAATTTTAACATATTCATCAATATTACATCACCTTCATAACCATTTAAACCTAATGGCAGGTCCAATAAGCTCAACCACTTCTCGTATTAAGCCACGTCATGTCAGTCGCCACCATGAACTTTACCCTAGTTTTGACTCCAACCAGTGGAACGTAGTCACAGGTGCCCTGCACACAGCTTTGATAGTTAGTACCTGTGCTAACAGGTTACCTAATGCCCGCTTTTATCTGAAGTGTAATCGCATGAGTCTAAATTAGTTCTAAATGCATTCTGTTTGTCAAAGACATTGATGGACCAACAGTGGTCTGATGTTTTGTTATATTGGACATGCACTGAAGCTCTCTATGTGGCTGAGAAATGATATGGATCTGGCTGTAGTTTTGACATCATAATAGCGTGTTGGCTGCttgcagcagtgtgtgtttaattattattttttgtctttgttttctgaGAGCACAGTGCTTGATGGCAGATTCTGCAGGTGACAAGGCACACCTTGACATGGTGACAGCCCATACGCTACATGCACTTTACTGAATGCAAAAGAGAGCAAGGGTTGTGAGACATATTCATTTTGGTTCAAGTTTCAAAGAgaagtttgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagagagtaagcTCAAAAGATATGTTTGGAATAGAGTCGAAGATAATTGTCCTTTTCCTCTAAAATCATTTAGCCTGATTCTCTTAAAGCCTGCTACTGAGATGTGGCTTTTTGCATTTTCAGATAATATTTACACCATATGTGTTTTCTCACACATGTATCTTTTAGCAATATATTGTGTGTCAGCATATAGGTAATCAGAGATAGGAATGCCTGCAGTTTTGGGAGCTGCCAGATTTGCGATTCTTCCCAAGCAGAGCAATGTTTCAAACTCCAGCTAAAATCTACAAAAAATTACAGCTCAACATAGTCAGAAGCCGTtctatatacagacacacatataaaatatgtgcatataaatacatatatttgtttgtgattAATATCTATTTatccatatatactgtatatatgaatACATTTGCTTGAATGCttgttatacatatatatgtactgCAAATATAAACAAGTTCATATATTTCAAACGTTTCTGATGTTATTCTATCTATGAGGTTAGGATGTCAAGTTAAAAAAGATAAGGCTGTGATACGGAGCAGCCCCTCCCATGCACTCGCCATCCCTCCCAAGACAAaatgagaagagaaaaaataaacattttgagTAATTGTAAACTAGCGAAGTGAGAGACCCCATTTGGTCATCTGAAATAGTTTTGCCTGTATTCAAAAAGCACATCagcaatatatatgtatatatacatgtgttGTATATATTCGAAATGTACACTTCCTTTAAGTGCAACTCCTCAACCAGTTAACACTGACTGAAAGAGATGCAGTGGTCCGAGTATATTAGAGCTACAAGTCCTCagcaataaaaatgtttggtCTTTTGGTCCCTAAAACAACTAAGGAATGACAGGTAAGACTCCCTGGAGACCGTTGCTATGGCTCTCCTTGGCAACGGTATCCCCTGGAAACGGACAGGCACTCCAAGCTAAAGATGGCCATCCCAAATCGAAGCCAATTTGTGTCCTGAAAATATCACATTCCCTACTTTAGTTCTCTTTCCGAGAATTTCTTGTCCCTTTTTGTTTCAAGTCTTATAAATTGGTCTTCAAAAGTCAATTGCCCCAAACTCAAACCGTCTTACAGAAAGATTTCCTACGGCAATCTTCTATtcagtttttaaaaagttttgttCTTGTTGGACTTTTGACATCCGTATTCCCTTTAAGAGTTCAGTGGGGTTGGTCATTGTAAGTAGGTATTGATAGagtttcttttactttttttcccctcattgTTCAAGTAAAAGTTTTTGTGGTCCAGAAAAGGTAGCTGTTATTCAAGCAGGGTTTTGTAGGGAAGgaggtgtgtatatgtgtgcagaAGAAAAAAGGTCCTGGGGCTAACCAGGCTGGTACAAATTCTCTCTGAGTTCCAAAGTTTTAGTACATCCAAAAAGAGGTGTCCTTGACTCTGTCATCGCACGCTTTCTCCTCGGTTTCTGAAGCAGCCTCTGTGGTCAAGATGCTGAGTTTGCACTCAGTGGCGGGTAGCAAGAAGTCAACATATGATTCAGCTCAACAAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU50106 True 4955 lncRNA 0.37 2 10554032 10559006

Neighbor

gene id symbol gene type direction distance location
kiaa1328 NA coding upstream 651 10536453 ~ 10553381 (+)
aqp7 aqp7,LOC104921067 coding upstream 21945 10528380 ~ 10532087 (+)
mlnl NA coding upstream 51600 10499573 ~ 10502432 (+)
ubap2a ubap2,LOC102784312 coding upstream 63982 10469385 ~ 10490050 (+)
dcaf12 dcaf12,LOC102784774 coding upstream 85877 10453933 ~ 10468155 (+)
dnai1.2 dnai1 coding downstream 385182 10944188 ~ 10966216 (+)
LOC120556651 NA coding downstream 469789 11028795 ~ 11050816 (+)
LOC120557557 LOC106915059,LOC102221633,LOC106958204,LOC103464975,LOC100700174,LOC102210230,LOC102299123 coding downstream 492104 11051110 ~ 11053203 (+)
cita LOC100706533 coding downstream 495184 11054190 ~ 11098050 (+)
myl2a LOC104927948,LOC103386220,LOC103366907,LOC100699907 coding downstream 541127 11100133 ~ 11103661 (+)
G37337 NA non-coding upstream 27096 10526699 ~ 10526936 (+)
G37238 NA non-coding upstream 100301 10453485 ~ 10453731 (+)
G37215 ube2r2 non-coding upstream 119330 10402258 ~ 10434702 (+)
G37198 NA non-coding upstream 242869 10310067 ~ 10311163 (+)
G37186 NA non-coding upstream 293703 10257250 ~ 10260329 (+)
G37363 NA non-coding downstream 101860 10660866 ~ 10661324 (+)
G37367 NA non-coding downstream 237973 10796979 ~ 10797424 (+)
G37370 kiaa1161,LOC103376128 non-coding downstream 351291 10910297 ~ 10915799 (+)
LOC120557560 NA non-coding downstream 369471 10928477 ~ 10929387 (+)
G37383 fam219a non-coding downstream 377677 10936683 ~ 10943626 (+)
glrx glrx other upstream 157845 10387908 ~ 10396187 (+)
G37197 NA other upstream 244036 10305187 ~ 10309996 (+)
prickle2b prickle2 other upstream 697376 9760233 ~ 9856656 (+)
G36744 NA other upstream 2325312 8227762 ~ 8228720 (+)
hcfc1a hcfc1,LOC102799381,LOC102206223 other upstream 3247689 7288907 ~ 7306343 (+)
G37397 LOC102299939,LOC103353648,LOC103366902,LOC102208776,LOC100700987,LOC104921056 other downstream 438224 10997230 ~ 11012909 (+)
G37525 evc2 other downstream 793072 11352078 ~ 11352387 (+)
LOC120557336 LOC103359259,LOC100704408,LOC101476502,LOC102796717,LOC102216118 other downstream 826178 11385184 ~ 11394398 (+)
G37597 NA other downstream 1221172 11780178 ~ 11805394 (+)
G37714 NA other downstream 1694060 12253066 ~ 12254974 (+)

Expression


Co-expression Network