G41672


Basic Information

Item Value
gene id G41672
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 25750470 ~ 25750713 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU56028
TTTTACATGGGTCTTAAACCTTAAACAGCAGCTAAGTTAGTGACAGAGTTTTAGCACCGCAACTCAATCATGTTGATTATAGTATTATTCTGCCACCCATTATGTATTCCAATAGCACACCCCACTCACTAAGTAGCTGACACAACCCACACATTTTGGAAATACAATTTGACCCAGGTCTGACATAAGCAAaccgtttgttgaaatgttgttgttgttatttattaaacacGTATACATGCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU56028 True 244 lncRNA 0.37 1 25750470 25750713

Neighbor

gene id symbol gene type direction distance location
slc5a8l LOC104941457,LOC107385050,LOC108231644,LOC106517671,LOC100705258,LOC102208231 coding downstream 35787 25707362 ~ 25714683 (-)
si:ch211-105j21.9 NA coding downstream 46075 25701533 ~ 25704395 (-)
ppm1j LOC104918364,LOC103356064,LOC101471645,LOC102210217 coding downstream 357408 25372571 ~ 25393062 (-)
LOC120557749 LOC103356055,LOC100694803,LOC103386563 coding downstream 382281 25347842 ~ 25368189 (-)
LOC120557765 NA coding downstream 653952 25092524 ~ 25096518 (-)
ngfb ngf,LOC104950112,LOC103386552 coding upstream 5039 25755752 ~ 25785177 (-)
rplp2 rplp2,LOC104941383,LOC104918380 coding upstream 134512 25885225 ~ 25887817 (-)
LOC120558087 LOC103356190,LOC104941391,LOC104918381 coding upstream 141498 25892211 ~ 25894753 (-)
tnnt2b LOC106518297,LOC108231683,LOC106954216,LOC103464708 coding upstream 247427 25998140 ~ 26009426 (-)
tnni1b LOC100707116,LOC103355871,LOC102788487,LOC102201587,LOC101487442,LOC107385035,LOC106518298,LOC101156569,LOC106582713 coding upstream 259678 26010391 ~ 26018731 (-)
G41663 NA non-coding downstream 26632 25722808 ~ 25723838 (-)
G41632 NA non-coding downstream 125024 25625220 ~ 25625446 (-)
trnas-uga NA non-coding downstream 224269 25526120 ~ 25526201 (-)
G41604 LOC103356036,LOC104945687 non-coding downstream 424502 25325507 ~ 25325968 (-)
G41593 NA non-coding downstream 456216 25293964 ~ 25294254 (-)
G41699 NA non-coding upstream 81248 25831961 ~ 25832682 (-)
G41711 NA non-coding upstream 137727 25888440 ~ 25889469 (-)
LOC120558090 NA non-coding upstream 139178 25889891 ~ 25890783 (-)
G41717 LOC103356200 non-coding upstream 154081 25904794 ~ 25905166 (-)
G41718 NA non-coding upstream 156116 25906829 ~ 25909034 (-)
tspan2a tspan2 other downstream 10364 25723968 ~ 25740106 (-)
ncoa5 NA other downstream 392536 25310745 ~ 25357934 (-)
manbal manbal other downstream 725409 25022436 ~ 25025061 (-)
LOC120556806 NA other downstream 862244 24886070 ~ 24888226 (-)
G41167 slc32a1,LOC103135573,LOC102216414,LOC106515126 other downstream 2596734 23151085 ~ 23153736 (-)
LOC120557963 grm4,LOC108231655,LOC100700221,LOC102289456,LOC104955002 other upstream 574033 26324746 ~ 26483541 (-)
G41944 NA other upstream 1027586 26778299 ~ 26894030 (-)
LOC120557442 hes5,LOC104956007 other upstream 2991085 28741798 ~ 28750233 (-)
LOC120556842 rpp14,LOC102775666,LOC101465350,LOC103374991 other upstream 4285669 30036382 ~ 30037321 (-)
romo1 romo1,LOC102788570 other upstream 4375038 30125751 ~ 30130317 (-)

Expression


Co-expression Network