G52197


Basic Information

Item Value
gene id G52197
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 22467071 ~ 22467531 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU69697
tgaatttaaaaaagtggttgtcTAATAACAAACTCCAAAATAAAAGGAGATATCGCTAGACTCCCAATATTCAATGTAACTTGTCTAAGCAGACCTGATTATGTACTGCAAatttaattacacatgaatTGTAAAGAGGTTTCTACAGTATGTGCTTATTTTTCTGTCACAATATTAACAAAACAATGGGCAAAGTCACTAACTTTGCAACACTACATTTTGAATCTGCTGGTGAAATTGTGCAGAAATAAGTGCATTTCTATGTTAAGCATGTAATAAGGAAATAGTCGCACAACACACACTCCCTTCCACTACATAACGAAAGGGCTAATCACCCAAAACCTGAGGGACTTTTTAAATTAAGTATTGTTTTactctgagttttttttaaggttCATGGATCTCCATTGTGTCTTACAGCTTTTAACCCCAACTTcttgaaaaatgtgtttcaagCGTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU69697 True 461 lncRNA 0.34 1 22467071 22467531

Neighbor

gene id symbol gene type direction distance location
asb8 asb8 coding downstream 89 22464122 ~ 22466982 (-)
atf7a atf7,LOC107095163 coding downstream 5587 22443502 ~ 22461484 (-)
dip2ba LOC103368268,LOC103384622 coding downstream 25242 22397870 ~ 22441829 (-)
scn8aa LOC103368290,LOC104932970 coding downstream 78867 22341425 ~ 22388204 (-)
fignl2 fignl2,LOC104932960,LOC104962574 coding downstream 171630 22279402 ~ 22295441 (-)
LOC120558867 LOC103368251,LOC102792734 coding upstream 4149 22471680 ~ 22481884 (-)
LOC120558868 pfkm,LOC103368244 coding upstream 15752 22483283 ~ 22492932 (-)
LOC120559491 NA coding upstream 28089 22495620 ~ 22502851 (-)
inavaa LOC103368199 coding upstream 78387 22545918 ~ 22554730 (-)
zgc:195245 LOC104964406,LOC106525460,LOC105931770 coding upstream 88762 22556293 ~ 22560326 (-)
G52137 NA non-coding downstream 139193 22327655 ~ 22327878 (-)
G52135 NA non-coding downstream 163277 22303165 ~ 22303794 (-)
G52124 NA non-coding downstream 201018 22243811 ~ 22266053 (-)
G52128 LOC101065051,LOC100704616 non-coding downstream 218351 22248137 ~ 22248720 (-)
G52127 LOC106567007,LOC105928945,LOC103368323 non-coding downstream 218988 22247110 ~ 22248083 (-)
G52231 NA non-coding upstream 68021 22535552 ~ 22538147 (-)
G52232 LOC106525430,LOC105354359 non-coding upstream 71908 22539439 ~ 22541999 (-)
G52233 NA non-coding upstream 75794 22543325 ~ 22543913 (-)
G52234 NA non-coding upstream 76503 22544034 ~ 22545473 (-)
G52238 NA non-coding upstream 94671 22562202 ~ 22562541 (-)
LOC120559880 LOC104932903,LOC103358260,LOC104967532,LOC107390844 other downstream 237650 22223149 ~ 22229421 (-)
si:dkey-151g10.3 wnk3 other downstream 452028 21970052 ~ 22015043 (-)
esyt1a LOC104932417,LOC104956886,LOC103356920 other downstream 1250352 21199340 ~ 21216719 (-)
fmnl3 fmnl3 other downstream 1268028 21167904 ~ 21199043 (-)
LOC120558386 hoxc10,LOC100690382 other downstream 1514553 20820171 ~ 20952518 (-)
G52226 NA other upstream 62075 22529606 ~ 22530708 (-)
si:ch211-150o23.3 LOC103367744,LOC101075068 other upstream 746567 23214098 ~ 23218900 (-)
G52501 eno1,LOC104965722,LOC103151087 other upstream 840969 23308500 ~ 23319684 (-)
masp2 masp2,LOC106536928,LOC103357864,LOC107086886 other upstream 1867618 24335149 ~ 24339456 (-)
phactr3a LOC100701276,LOC107550338,LOC107551495,LOC104947949,LOC103365918,LOC106955159 other upstream 2282900 24750431 ~ 24785005 (-)

Expression


Co-expression Network