G52233


Basic Information

Item Value
gene id G52233
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 22543325 ~ 22543913 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU69752
GTTGTCATTGGTCACAGAGCAGCTGGACTCTGATCTCAGGGGGGGAGACGGACAGGTGAGGAAGGATTCTTTGCTGAAGGACCTTCTGGGAGTAGCTTGTTTCTTTAAGTCTTGCTTTATCTTCTCCTGGATTTGGCTGGGAATAAGTGTTATGCTGACTCTGCGACGAAGGctCTGATGAGAGCTTTTCTTTCTGATGTCACTTTCCTCTGGATCTGGCGATGCTCTTTGGTCGATGCTCTTTTGCTGCTGGATCGTCTTCTTGGCCTCCTCCAGCTCTAGCACGTTTCTCTCATGTTGTCTCCTCAGATTCTCCACATGAGCAACCATCAGTTCGACTTCATGACTCAC

Function

NR:

description
PREDICTED: signal-induced proliferation-associated 1-like protein 2 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU69752 True 351 lncRNA 0.49 4 22543325 22543913

Neighbor

gene id symbol gene type direction distance location
LOC120559491 NA coding downstream 40474 22495620 ~ 22502851 (-)
LOC120558868 pfkm,LOC103368244 coding downstream 50393 22483283 ~ 22492932 (-)
LOC120558867 LOC103368251,LOC102792734 coding downstream 61441 22471680 ~ 22481884 (-)
asb8 asb8 coding downstream 76343 22464122 ~ 22466982 (-)
atf7a atf7,LOC107095163 coding downstream 81841 22443502 ~ 22461484 (-)
inavaa LOC103368199 coding upstream 2005 22545918 ~ 22554730 (-)
zgc:195245 LOC104964406,LOC106525460,LOC105931770 coding upstream 12380 22556293 ~ 22560326 (-)
c5h1orf194 NA coding upstream 38161 22582074 ~ 22584094 (-)
lhfpl5b lhfpl5,LOC102777996 coding upstream 83363 22627276 ~ 22631134 (-)
dclre1b NA coding upstream 202181 22746094 ~ 22750778 (-)
G52232 LOC106525430,LOC105354359 non-coding downstream 1326 22539439 ~ 22541999 (-)
G52231 NA non-coding downstream 5178 22535552 ~ 22538147 (-)
G52197 NA non-coding downstream 75794 22467071 ~ 22467531 (-)
G52137 NA non-coding downstream 215447 22327655 ~ 22327878 (-)
G52135 NA non-coding downstream 239531 22303165 ~ 22303794 (-)
G52234 NA non-coding upstream 121 22544034 ~ 22545473 (-)
G52238 NA non-coding upstream 18289 22562202 ~ 22562541 (-)
G52244 smc5,LOC102791010 non-coding upstream 24749 22568662 ~ 22569283 (-)
G52273 LOC106572836 non-coding upstream 67981 22611894 ~ 22616052 (-)
G52428 NA non-coding upstream 522278 23066191 ~ 23067400 (-)
G52226 NA other downstream 12617 22529606 ~ 22530708 (-)
LOC120559880 LOC104932903,LOC103358260,LOC104967532,LOC107390844 other downstream 313904 22223149 ~ 22229421 (-)
si:dkey-151g10.3 wnk3 other downstream 528282 21970052 ~ 22015043 (-)
esyt1a LOC104932417,LOC104956886,LOC103356920 other downstream 1326606 21199340 ~ 21216719 (-)
fmnl3 fmnl3 other downstream 1344282 21167904 ~ 21199043 (-)
si:ch211-150o23.3 LOC103367744,LOC101075068 other upstream 670185 23214098 ~ 23218900 (-)
G52501 eno1,LOC104965722,LOC103151087 other upstream 764587 23308500 ~ 23319684 (-)
masp2 masp2,LOC106536928,LOC103357864,LOC107086886 other upstream 1791236 24335149 ~ 24339456 (-)
phactr3a LOC100701276,LOC107550338,LOC107551495,LOC104947949,LOC103365918,LOC106955159 other upstream 2206518 24750431 ~ 24785005 (-)
acot7 acot7,LOC102782704 other upstream 3366842 25910755 ~ 25972322 (-)

Expression


Co-expression Network