LOC120558867 (LOC103368251,LOC102792734)


Basic Information

Item Value
gene id LOC120558867
gene name LOC103368251,LOC102792734
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 22471680 ~ 22481884 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800175.1
ATGAGTTCAGATCAGAGCGGAGAGCCGCCGCTGCTGCAGGAGGAGGCTGATCCCGGACCGAAGACCGGTGGGAAGGACGAGGCTCCGCTGGGGAGCGAGGGAGGGTCAGGCGGCATGGTCACCTCTAAGGGCGCCGGTCTGAACCCAAATGCCAAGGTGTGGCAGGAGATGCCTGTGGCCCCCAGCGAGGCTGTTGCCAACAGCCCTCATTGGCCCCCCTCAGACATCAGTGAGGGTTATTCTGAGCCTTCGTCTGTCGGGTGCAAGCAGTACACTGTGGGATTCCCAGCCGTGGATGACAGCAGCTCCACAGCAACAGCTGAGATAGCAGTAAATGGAATGGACCCTCCAGAGTTGGGCTTTCCCCCTGCTGAGTCCACCACGGGGACCTCAGTGGAGTCCAAAACTGAAGAACCATCTCCGATCTCCTCTGAGAATCTACGAGAGTCTCTGAAGAAGGAGCTGGAGTTTTATTTCTCCAGAGAAAACCTCTCAAAGGATTTGTACCTGATGTCCCAGATGGACAGTGACCAGTTTGTCCCTATATGGACTATAGCCAGCATGGAGGGCATCAAGATCCTCACCACTGACATGGACCTCATCCTGGATGTGTTGAGATCTTCTCCTATGGTACAAGTGgatgagaaaggggagaaagtGCGTCCTAACCACAAGCGATGCATTATCATCCTAAGGGAGGTCCCCGAAACAACACCCGTTGAGGAAGTGGAGTCACTGTTCAAAAATGACAACTGTCCAAAGGTGATAAGTGTTGAATTCGCACACAACAACAACTGGTACATCACATTCCAATCAGACACAGACGCTCAGCAGGCATACAAGTATTTAAGAGAGGAGGTAAAAACATTTCAGGGAAAACCCATTATGGCCAGGATAAAGGCCATCAACACATTCTTTGCAAAGAATGGCTACCGTAGCATGGACAGCAGCCTGTACGCTCAGCAGTCCCAGAGCCAGTCCCAGTACAGCTCTCCGCTCTACATGCAGCACGTCTACCCCCAGCAGCAGTACCCAGTCTACGGCATCGTACCTCCCACCTGGACGCCTTCGCCCACGCCCTATTTTGAAACTCCTCTGGCACCGTTTCCCAACAGTAGCTTTGTGAATGGATTTGGCTCTGCTGGACACTACAAAACTGgctccagttctcttaatatcACTCGTCCTTTCAACAGAAACCGTGTTCCCCTCTATTCAAGAAAGAATGTAATAAATGCCTTCAGAAACCATGTAAAGCCCCAGGCGAGGACAAGTGAGGTGACCTCAGCATCTATAACTCCTGTCCCCTTGGAGAGTCTGACTGGATTGCGCAGCCCGCAGCCCCCCGCTCCCGTTGTCGTTGCCGCCGCCACCACAAACCCAGTCCAGACAGCCTCTGACCTGGGCTCGGCGTTCTcacatctctcctcctctccctcgtCTTTGGATCCCAGTGATGACGGCAGCATGGCTGGACGTGGAAGaCGGAGCACAACCTACAGAGGAACACGGAGGAGGCGAGAAGACGAACGGATTGCGAGGCCTGTACCGCTAGCAGAGGTCAAGGTTTCTCCACCCAAATTTGACTTGGCTGCTACCAATTTCCCACCTCTACCTGGCTGCGTGGTCAGTACACAGGGAGAACCGGTGCTAGAAAACCGAATGTCTGATGTTGTACGCGGTTTGTACAGGGACAAGACCGAACAAGCCAATAAAGAAGCCACTGTGAGTCCAGGTTCAGGCCAACCCCCAGTCACAGAGGATGCTGTGGCTGTCTCCAGTCCTGCCCTGGCAACACTGAAATCTGCTACACAACCACTTGGACCCTCAACCCCTGGTATCACTCGTCAGGAGAAGAGGGTTGAACGGGCAGAGCCTCCAGTTCCAAAAGTGGCTCCACGCACACCTGTTACTACCGTAATCCCATCCCCCACCATACAACCCGTGCCTAGCTCCAGGCCTCAGCCCGCTGCTGTTGCTGCCACCTCCACGCCCTCAACTCCCAGCACGCCGGCCCCTGCTACAGCCACTATTCCCACCCCTGCACAGGAGCCACGTAAGCTCAGCTACGCTGAGGTATGCCAACGGCCACCCAAGGACCCTCCGCCTGCAGCCCCTGCCCCAGCTTCCACAGGCACCGCTTCGGGCCAGCCGTTACGTGAGTTGCGCGTGAACAAGGCTGAAGAGCTGGGCTCCAGCAGCGGTCCTGGAGACAAGCAAGAGAGAGGCCACGACAGGGAGGGGGGATGGGAATGCAAGGAGAGCCGACCACCACGTGAACGTGACTCTCAAGGCTACTACCGCAGCAATGGGCCCAGAGGCACCGGGGGCCTCAAGTTTCGGGACCAGAGGCGCCCGCCTCCGGCCCGACGCAGCTCCCCACAGGGAGGCTACAGGCACACTGGCAAAGAGCAGAATATCCCACCAGTATCGCCAAAGTAAAAACTTGAtatgaatagaaaaaaagatgtaTGAATATATACAtggaatatataattatataaaaatgaataaCATAAAAGCAACAACATTATGGTAGCCACCTCCCC
>XM_039800176.1
CCGGGACGTCGGGCGGACTGTGTGCCTGCGCTGAGGAAGGGTGCGTGTCCCCAGTGTTCGCTCCGGTCGCCCGGTTAGGAATACGCCTAACGAACCCGGTGTAATATTGAAACGCCAGCAAGGACTGTGGTCTAAGAAGAGTCATGGTTTGGCATCGCTTATACCATTAGTGTCTTAGCGTGCAAGTTTGATTCATTGAGCTAGTGGCGTTAGCCCGCTTCGTTGATTCATAGCACGCTAGGTCGCTAGCTTTAGTCCTGTAGCATACCTGCTAgccggctagctagctagctagtaagctAGTTTCAGTGTACTTCTGGTCAATCCAGTGGAATAGGAGAGAACCAGACTGACTGCTGAACCCATCCGCTATTTCTGAAAGAGGAGGTGGGGCAGGCGGGGGCCGGGAGAACGCGACGGAGTGGAAGTGAGTCAGGAGCGGCTGATGAGTTCAGATCAGAGCGGAGAGCCGCCGCTGCTGCAGGAGGAGGCTGATCCCGGACCGAAGACCGGTGGGAAGGACGAGGCTCCGCTGGGGAGCGAGGGAGGGTCAGGCGGCATGGTCACCTCTAAGGGCGCCGGTCTGAACCCAAATGCCAAGGTGTGGCAGGAGATGCCTGTGGCCCCCAGCGAGGCTGTTGCCAACAGCCCTCATTGGCCCCCCTCAGACATCAGTGAGGGTTATTCTGAGCCTTCGTCTGTCGGGTGCAAGCAGTACACTGTGGGATTCCCAGCCGTGGATGACAGCAGCTCCACAGCAACAGCTGAGATAGCAGTAAATGGAATGGACCCTCCAGAGTTGGGCTTTCCCCCTGCTGAGTCCACCACGGGGACCTCAGTGGAGTCCAAAACTGAAGAACCATCTCCGATCTCCTCTGAGAATCTACGAGAGTCTCTGAAGAAGGAGCTGGAGTTTTATTTCTCCAGAGAAAACCTCTCAAAGGATTTGTACCTGATGTCCCAGATGGACAGTGACCAGTTTGTCCCTATATGGACTATAGCCAGCATGGAGGGCATCAAGATCCTCACCACTGACATGGACCTCATCCTGGATGTGTTGAGATCTTCTCCTATGGTACAAGTGgatgagaaaggggagaaagtGCGTCCTAACCACAAGCGATGCATTATCATCCTAAGGGAGGTCCCCGAAACAACACCCGTTGAGGAAGTGGAGTCACTGTTCAAAAATGACAACTGTCCAAAGGTGATAAGTGTTGAATTCGCACACAACAACAACTGGTACATCACATTCCAATCAGACACAGACGCTCAGCAGGCATACAAGTATTTAAGAGAGGAGGTAAAAACATTTCAGGGAAAACCCATTATGGCCAGGATAAAGGCCATCAACACATTCTTTGCAAAGAATGGCTACCGTAGCATGGACAGCAGCCTGTACGCTCAGCAGTCCCAGAGCCAGTCCCAGTACAGCTCTCCGCTCTACATGCAGCACGTCTACCCCCAGCAGCAGTACCCAGTCTACGGCATCGTACCTCCCACCTGGACGCCTTCGCCCACGCCCTATTTTGAAACTCCTCTGGCACCGTTTCCCAACAGTAGCTTTGTGAATGGATTTGGCTCTGCTGGACACTACAAAACTGgctccagttctcttaatatcACTCGTCCTTTCAACAGAAACCGAAACCATGTAAAGCCCCAGGCGAGGACAAGTGAGGTGACCTCAGCATCTATAACTCCTGTCCCCTTGGAGAGTCTGACTGGATTGCGCAGCCCGCAGCCCCCCGCTCCCGTTGTCGTTGCCGCCGCCACCACAAACCCAGTCCAGACAGCCTCTGACCTGGGCTCGGCGTTCTcacatctctcctcctctccctcgtCTTTGGATCCCAGTGATGACGGCAGCATGGCTGGACGTGGAAGaCGGAGCACAACCTACAGAGGAACACGGAGGAGGCGAGAAGACGAACGGATTGCGAGGCCTGTACCGCTAGCAGAGGTCAAGGTTTCTCCACCCAAATTTGACTTGGCTGCTACCAATTTCCCACCTCTACCTGGCTGCGTGGTCAGTACACAGGGAGAACCGGTGCTAGAAAACCGAATGTCTGATGTTGTACGCGGTTTGTACAGGGACAAGACCGAACAAGCCAATAAAGAAGCCACTGTGAGTCCAGGTTCAGGCCAACCCCCAGTCACAGAGGATGCTGTGGCTGTCTCCAGTCCTGCCCTGGCAACACTGAAATCTGCTACACAACCACTTGGACCCTCAACCCCTGGTATCACTCGTCAGGAGAAGAGGGTTGAACGGGCAGAGCCTCCAGTTCCAAAAGTGGCTCCACGCACACCTGTTACTACCGTAATCCCATCCCCCACCATACAACCCGTGCCTAGCTCCAGGCCTCAGCCCGCTGCTGTTGCTGCCACCTCCACGCCCTCAACTCCCAGCACGCCGGCCCCTGCTACAGCCACTATTCCCACCCCTGCACAGGAGCCACGTAAGCTCAGCTACGCTGAGGTATGCCAACGGCCACCCAAGGACCCTCCGCCTGCAGCCCCTGCCCCAGCTTCCACAGGCACCGCTTCGGGCCAGCCGTTACGTGAGTTGCGCGTGAACAAGGCTGAAGAGCTGGGCTCCAGCAGCGGTCCTGGAGACAAGCAAGAGAGAGGCCACGACAGGGAGGGGGGATGGGAATGCAAGGAGAGCCGACCACCACGTGAACGTGACTCTCAAGGCTACTACCGCAGCAATGGGCCCAGAGGCACCGGGGGCCTCAAGTTTCGGGACCAGAGGCGCCCGCCTCCGGCCCGACGCAGCTCCCCACAGGGAGGCTACAGGCACACTGGCAAAGAGCAGAATATCCCACCAGTATCGCCAAAGTAAAAACTTGAtatgaatagaaaaaaagatgtaTGAATATATACAtggaatatataattatataaaaatgaataaCATAAAAGCAACAACATTATGGTAGCCACCTCCCC

Function

NR:

description
PREDICTED: la-related protein 4-like isoform X2

GO: NA

KEGG:

id description
K18763 LARP4; la-related protein 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800175.1 False 2549 mRNA 0.55 17 22471680 22481439
XM_039800176.1 True 2952 mRNA 0.55 16 22471680 22481884

Neighbor

gene id symbol gene type direction distance location
asb8 asb8 coding downstream 4698 22464122 ~ 22466982 (-)
atf7a atf7,LOC107095163 coding downstream 10196 22443502 ~ 22461484 (-)
dip2ba LOC103368268,LOC103384622 coding downstream 29851 22397870 ~ 22441829 (-)
scn8aa LOC103368290,LOC104932970 coding downstream 83476 22341425 ~ 22388204 (-)
fignl2 fignl2,LOC104932960,LOC104962574 coding downstream 176239 22279402 ~ 22295441 (-)
LOC120558868 pfkm,LOC103368244 coding upstream 1399 22483283 ~ 22492932 (-)
LOC120559491 NA coding upstream 13736 22495620 ~ 22502851 (-)
inavaa LOC103368199 coding upstream 64034 22545918 ~ 22554730 (-)
zgc:195245 LOC104964406,LOC106525460,LOC105931770 coding upstream 74409 22556293 ~ 22560326 (-)
c5h1orf194 NA coding upstream 100190 22582074 ~ 22584094 (-)
G52197 NA non-coding downstream 4149 22467071 ~ 22467531 (-)
G52137 NA non-coding downstream 143802 22327655 ~ 22327878 (-)
G52135 NA non-coding downstream 167886 22303165 ~ 22303794 (-)
G52124 NA non-coding downstream 205627 22243811 ~ 22266053 (-)
G52231 NA non-coding upstream 53668 22535552 ~ 22538147 (-)
G52232 LOC106525430,LOC105354359 non-coding upstream 57555 22539439 ~ 22541999 (-)
G52233 NA non-coding upstream 61441 22543325 ~ 22543913 (-)
G52234 NA non-coding upstream 62150 22544034 ~ 22545473 (-)
G52238 NA non-coding upstream 80318 22562202 ~ 22562541 (-)
LOC120559880 LOC104932903,LOC103358260,LOC104967532,LOC107390844 other downstream 242259 22223149 ~ 22229421 (-)
si:dkey-151g10.3 wnk3 other downstream 456637 21970052 ~ 22015043 (-)
esyt1a LOC104932417,LOC104956886,LOC103356920 other downstream 1254961 21199340 ~ 21216719 (-)
fmnl3 fmnl3 other downstream 1272637 21167904 ~ 21199043 (-)
LOC120558386 hoxc10,LOC100690382 other downstream 1519162 20820171 ~ 20952518 (-)
G52226 NA other upstream 47722 22529606 ~ 22530708 (-)
si:ch211-150o23.3 LOC103367744,LOC101075068 other upstream 732214 23214098 ~ 23218900 (-)
G52501 eno1,LOC104965722,LOC103151087 other upstream 826616 23308500 ~ 23319684 (-)
masp2 masp2,LOC106536928,LOC103357864,LOC107086886 other upstream 1853265 24335149 ~ 24339456 (-)
phactr3a LOC100701276,LOC107550338,LOC107551495,LOC104947949,LOC103365918,LOC106955159 other upstream 2268547 24750431 ~ 24785005 (-)

Expression


Co-expression Network