si:dkey-190g11.3


Basic Information

Item Value
gene id si:dkey-190g11.3
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 22979891 ~ 22981827 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804010.1
ACTACTAACTACTACTTATGTACTGTGTTCCATGTCCCTTATTTGCCCTCCAGTAAAGATCAGACACTGAACATTATGCGGTTGCTTGAGGGATGAACAGGTTGCTTAGCAGATCTGGGATCAGGAGATGGAAGACTGGATAaTTTGATTTTCCAGGTGATTTCTCCTCTTTCTGCTGGTTTCCAGCGCACAGGGTTAGAGATTAACCCAATTTTAGTGTCCTATTCCAGGAGCAAGGCCCGCTGGACAGTAGTACCCTCTAGCCAGGCCacctttgttaaaaaaagactTCTCGAAGGTAAAACCTTTACAAAACATATTGCTTTTCTCAAGCCTTATCAAAGTTCGTATATGACCCTATTTGTGACTTCTGTGACAGCTTTCCTTGCTCCAGGAGTGaTGGAGGTCCTGGGTGAAAAGCTGTTGAAAGAGCTTCCTGAGGATGTGTGTGTCATCACTAGTCGTTTTCCTTTCCCCAACTGGCCACAACAAGCGTCTGTCGGCTCCGGTCTTGACTAAACTTTTGCTTATGACTTTAGCAATGTGCGCTCACACCTGAGAAAAGTACCAGAAACAGTGGAGTACTAAGTCACAGTCTCTCtgggttattttgtttttggcaTTGTCAAACAGCATGGACCCCTCcagacacatttctgttttctttataatatatttaaaggaaaaccagacaaagaaaatacatttgtagCAGGTAATCATAAACACTTTGGGGAAATACATTGAGAATATCTGTCACTTATGAGCACTGATCAGGAGTGATCATTTTGAAAGATGTATTTGAACATTGCAAGGATGAGAGGGACTCTGACTAAGCAAGATGTCATGATGATTTTGACATCATTTATCCCCTGCAGTATTTGTTCAAATTTTGCACAGCAACAACCGACTGAGCCTTTGCCAATTTGCTGACAATCTTGTTATAAATACCATCGTGCACCCCAATATCTCGAATATGGCTGTAGATCTCTTTCTAGAGCACTTTAACTACACATAATTTGACTTCCACATGAACACTAATAAACCTCCTTAATAGCATGTTGCATGAGGGGTTGTAAGGTCAATGTTttcgttattttgtcactttgctTTTGTTGGTTTGTAGTTAGATTACAAAGTGTGTCTCCCAGACAGCCACTGCGGGTTAGAGGCAGAAAGAAGTTTTTATGTTGTGAATGGTCTAGAATAATTATCTGTGTCACCTGACCCTTGTGGGTTATATGTGATATGTACTGGGTAGCCAAATAGACACATTAGTCTGAGAACCATGGCTATATGTGGAACCcgttgtttgtctgtttgtttgtttgtttgtttgttagcaGTATGATATTTCAATCAAATTTGCTGGAAAGTAAGGCCATTTGCCAATtcatttttatgaaaattgTATTGGCAGGGAGATACCATTTCTatagttttgattttatttggattcagatacacatgcacacaaaacattTGGTTTTGTTAAGATAACACATTTGAGAAATTGTACAGCCTTGGTTGAGGAATCTACTCTCTGTAAAGCATATCACGGAAAGTAGCACCTGCAGTGACATTGTCATTTGTCTAATTGTTCACACAGTAGGTCATTAAAATATTCCTGCATCTGCAagctaaaacacaaa

Function

NR:

description
PREDICTED: protein FAM173A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804010.1 True 1652 mRNA 0.39 3 22979891 22981827

Neighbor

gene id symbol gene type direction distance location
plk2b plk2 coding downstream 618 22974264 ~ 22979273 (-)
mier3b mier3 coding downstream 59573 22906455 ~ 22920318 (-)
LOC120559996 LOC100701823 coding downstream 155691 22823316 ~ 22824200 (-)
mpeg1.1 LOC102785973 coding downstream 159970 22816403 ~ 22819921 (-)
prf1.5 LOC104957351,LOC100696983,LOC108244797,LOC103355507 coding downstream 164312 22812184 ~ 22815579 (-)
pde4d pde4d,LOC102308022,LOC103135434,LOC106585366,LOC102789696 coding upstream 17979 22999806 ~ 23221652 (-)
elovl7a elovl7,LOC103364291 coding upstream 249697 23231524 ~ 23236341 (-)
ercc8 ercc8,LOC102791225 coding upstream 255526 23237353 ~ 23259552 (-)
pgm5 pgm5,LOC101471836,LOC102214827,LOC102292636 coding upstream 374526 23356353 ~ 23383596 (-)
cbwd cbwd1,cbwd3 coding upstream 405937 23387764 ~ 23403313 (-)
G63906 NA non-coding downstream 49684 22929899 ~ 22930207 (-)
G63902 NA non-coding downstream 73865 22903835 ~ 22906026 (-)
G63900 NA non-coding downstream 87063 22892465 ~ 22892828 (-)
G63884 NA non-coding downstream 144799 22833479 ~ 22835092 (-)
G63827 NA non-coding downstream 379474 22599523 ~ 22600417 (-)
G63926 rab3c,LOC102308854,LOC106945488 non-coding upstream 13328 22995155 ~ 22996881 (-)
G64059 dock8 non-coding upstream 503021 23484848 ~ 23487484 (-)
G64107 NA non-coding upstream 709859 23691686 ~ 23692599 (-)
G64122 NA non-coding upstream 741110 23722937 ~ 23723181 (-)
G64165 NA non-coding upstream 1011006 23992833 ~ 23993303 (-)
G63882 LOC104956296,LOC101068944 other downstream 146802 22830195 ~ 22833089 (-)
LOC120560435 idnk other downstream 1288341 21681976 ~ 21691550 (-)
rmi1 rmi1 other downstream 1352870 21616223 ~ 21627021 (-)
ntrk2a ntrk2 other downstream 1395615 21479786 ~ 21584276 (-)
G63487 NA other downstream 2287612 20691878 ~ 20692279 (-)
smim15 smim15,LOC106580593,LOC103398561 other upstream 293092 23274919 ~ 23281128 (-)
foxd5 LOC103358907,LOC104942959 other upstream 402891 23384718 ~ 23387305 (-)
lzts3b lzts3,LOC102793849 other upstream 1894768 24876595 ~ 24937440 (-)
rnf165b LOC102783683,LOC101475525,LOC103362723,LOC103470112,LOC101070551,LOC100705592,LOC107086292,LOC106944956,LOC103141773,LOC106924720 other upstream 2019496 25001323 ~ 25016921 (-)
LOC120560369 LOC104950284,LOC103362719 other upstream 2084933 25066760 ~ 25080769 (-)

Expression


Co-expression Network