LOC120561090


Basic Information

Item Value
gene id LOC120561090
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 36027310 ~ 36035340 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804045.1
ATGGACCTTGAGTCTGGCAATaaagttgatgatgatgatgatgatgatgatgatgatgatgttttccttttttatttgcatttcgtTCTGGCATGGCCTCAGGTCCTGACTATTACATGTAGGCGGATATATAAACACTGGATTTTCTCTTGTTCAGCACCAGGAAGGCTGAAGCCACACACTGACACTGAGATAGACGAAGAGAAGATCATTCTGAAACAGGTTACCATCATCCTTAACAACTCCGCCATGAAGATGCTGACTGTGTGTGCACTTCTGTGTGCAATGGTGGCTCTGACTGGAGCTTATCCAGGCATTTTGAAGGCAACTCAAAATCCAATTCCAACAGacacagatacgACTACTACGACTATTACTACGACTCCAAATTTGCCTGTAACAGAGGACCCTTTTGGTGGCTGGAGGCCATATTGTCCTGACGGTTGGACAATGTTCAACACTCGTTGTCTCCTCTACGTTCCAAAGAATATGACTTGGGCTCAAGCTGAGCAACACTGCAGGTACATGACTGGAAATCTTGCATCTGTAATCAACACTGAGTACTCTGACCAGATTCAAAAGGTGTTGCAGAGTGCCGGTCAAAAGTCTAAACAGATATGGGTTGGAGGCTATAATACACCAGAGCGTTCTTGGTCCTGGACCGATCCTTATTTATTTCACGGATTTCATGACTGGTGTATCCACTCCGATGTGGAGCCCGAGAACCCCACTGTGGAGTCCAAGAACCACTGTCTACAAATAACCTTTGAAGAAAATGCGTCAGGATGCTTGGACGACATGCAGTGTGATGCTGAGCTcccctcagtctgcagcattatCATCATGTGAATCCTGGGCTGAAAAAGAGGCAAGATCCATCTGTATCTTACagctttatttcttttctcttgCTTTAATGCTTCTTAAGGAACGAAGTCAACTGACCCAAAGAGGAGCTGAATTGTCTCTTAGAGTCTGTTTACACTTGGTTAAAATGAAGTAATCCGAGGACAAGTTAACAGCTGAGATACATCGCTGTTCACATCTGTGTCTATCATGCATCTCCAGCTGACCACTTGTGTTCACATTTCTTTTCTGCCTACATCACTGCcaaaggtatatatatatatatatatatatatatatatatatatatatatatatatatatatattaacatatatacatgcacacacacacatatatatacgtGTATATatcatgtatatatatagctgTGGCAGTGACGTAGGCAGAAACGAAATGTGAATGTAGCTGATTAGCCTaaggcatggtctaaaactctttatacaGATTTTTCTAGAtgtcaatgggagaaatgaatgggaaatttacttcaGGATCCCAAGGCCTCTCGTAGGAGGGGCGAAGCAATTGAGCTCTATTGTGTTCAAATTTCGTTTCTGCCTACGTCACTGCtacagctatatatatatatatatatatatatatatatatatatatatatatatactgtatatatcgcTGTCAGCTGAATCAAACACATCTCCTTCCAAATGGCAAAACTATGGACTATCACCAACAATTTGTCCAATTCATTGTAAAATGGGCCAGTTATAGAGGGTTGTCACACTGTCACCGCAACAACAACCTGTCCTGCATTGATAACGTATTTTCCTGTTAATGCCTTGTCAGGGACACATCAGGGCGCATTAGCGTTTACACTACAGAAAAAATGTGGTCAAATGCGTCACAGACCACCTCGGCAAGTGGTTTGAGTGATCGGATCACAATGCATCTTGGTTTAACACTGTCCACTCGTGATCTGATCGCCCAAgacacattttataaaacacaGCGTAACCAGGATCTTATATCTCATGACTTTAAAAAAGAGCAGACCGAATGCTTTTAGCACAACTTTAGTCTGCTTTAGTAACAGACTGGCAATTACTCAAGTGGAAATATGGAAAATGATCCTGAATTCGATACGagacaacaaaaaacatttgacacCCGATTTTGAGAGAGTAAACTATCATAAAAAGCGATGAGGCAGCATTTATTTGTTAACAGCCAACtactaaaaacaacaattttttttatctatacAGTTTTGATGAGTTGCCTGTAGAGCATTTAGCtgtaatttgtgtttttctgcagCCTAAGAGACATGTAAACACAAAGTTTGATTCAATCAGAGAGTTGATGATGTGTTTCGGCGGTGTTGGCCTGAGGAGGTGAGGACAATGGCGGACACATTTGAATACATACCCAGTTCCGGCCATGGACGGACAGTCAAACTGTGGACTTCTGAACAACACAGACATTTAAAACGACCCCTCCTTCTTCTTCAGTGACATTTTGCAGAAGTACACAAGCTCTGAATTCTAGCTGCTGGATGAAAACCCGACCTCACTGAACATTCCCTCACAGTACTAAACCTGAAacatgagcttttttttttcaaataagaaAAGTTGGGTTCCTTTTGTTGGCTTGAACAGATGTGGTTATTAAATACTACACCTGTGTTTAACTCTGATTTATTTTCAGACAGTAAACCTTTGTTTCTTCTCTCATTGTAGCGTTATAGATAATTGAGATCAGATTGTGTTGTTGGACATGGACATGGTTTAAATTGAAAGACTTGTTGGAGATTCCACAGTAACTCTTTGTAGCTTTAAAGTGAACAAACTTTAAACAAACCGTTTTGGAGACTCAAATTCCTGTTTCTTTTAATTCGGAGCGAGGCAGAAGGGGTCATGTAGAAAATGTAGTGTGTATGCGCAAAATAATAAACTGTGGTCTCAAATTATAAAATCATGCTTTTAGGCCAAACATTAAATGGTAcggtttaatatttttatagaCAGAATCTGAAGTAATTTGTTTTCTGATGGATGCAGGTGTCACTGAGAGTCAACACATTCAGAGTCAACACTGTTCACATTCAAGCAAGCTTTATTAATGCTATAATGCAGATTGATAACATGAGATATGAGCTCGGCTATATACAGCTCTGCAGGTACGTGTGGTTGTCGAGAACAAGTACACACACTGTGTGGATATACACTCTATACAGCATTCACCAACAAAAAGACACATTAGTTTGTAAGTCTGAGCAGGATTTACATCAGCATCTCATTTTGTCTCCATCTTGTGGTATTTTTGGTTAAATTCAGTTTGGGgacataaaatgtaaaaacaatctGAAAAACCTGACTTCATTTCGACTAAAATAATCTGGTTCATTTGTTTTACGACAGATCTAATAATCAGTTTTTGCTTTAACCAGGTTATAATTGAATTGATTACGTCACGTGCAACTTAAACTTCATTCTTCTGTAGCGCTCCCCGTTTCGTCCGTTTGTGTTCATTTTCAAGCTTATATGAGTTCATCTCAGTAGCTGcaagaaacaaaagaacaacaaaatcaaTCACTAATTGATcattaaacctacattgtgtaattgtttgagttgattcttagcaaaaaaaactttgttctttcacaaatatgtgctcattcatgtgtaattacttccccCAACTAATCAatgtattctcgtaagcgttagagaatttttgtgttttacaatcattcagaatacatacgagcgagtcgctGGAATGACGGCCGGCATGTtgtgcctccatctttaaaatacatcagccaaagagggacatacctccgccttttgCCCTTTTACACTCAGTTGCACcatgacgaatgccagggggagattacagGCAAAGCATCAAGactaaagttaatattggaATATAGCAGTTAAAACGTgatcggaatgggaggggctagaaagtaatattcagttggttgtcatatactatttcaccgctagatgggaggaATTATTaaacaatgtagctttaaagatTGGCAGATGATGTTAGATACTAGGTTGAAAATATATTATCAGTTCTCTCTTTTCTGTCATATTGAAAGGAAC

Function

GO: NA

KEGG:

id description
ko00983 Drug metabolism - other enzymes

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804045.1 True 3959 mRNA 0.39 9 36027310 36035340

Neighbor

gene id symbol gene type direction distance location
rnf214 LOC104937101,LOC104945828,LOC102078715,LOC101469573,LOC102289946,LOC102794451,LOC102193077,LOC104967173 coding upstream 231076 35789091 ~ 35796234 (+)
LOC120561433 ppic coding upstream 343766 35675371 ~ 35683544 (+)
LOC120560626 NA coding upstream 407444 35613850 ~ 35619866 (+)
LOC120560627 NA coding upstream 415328 35607468 ~ 35611982 (+)
LOC120560628 NA coding upstream 423973 35596806 ~ 35603337 (+)
trnai-aau_2 NA coding downstream 126058 36161398 ~ 36161471 (+)
trnaf-gaa_4 NA coding downstream 141139 36176479 ~ 36176551 (+)
cemip2 tmem2 coding downstream 142889 36178229 ~ 36217618 (+)
klf9 LOC103362104 coding downstream 405792 36441132 ~ 36445767 (+)
LOC120560019 NA coding downstream 434338 36469678 ~ 36477494 (+)
LOC120560688 NA non-coding upstream 129127 35895151 ~ 35898183 (+)
G66997 NA non-coding upstream 609503 35388776 ~ 35417807 (+)
LOC120561203 NA non-coding upstream 769238 35255661 ~ 35258072 (+)
G66907 NA non-coding upstream 1025114 35000278 ~ 35002196 (+)
G66834 NA non-coding upstream 1197656 34828892 ~ 34829654 (+)
G67202 NA non-coding downstream 20344 36055684 ~ 36059486 (+)
G67216 NA non-coding downstream 59475 36094815 ~ 36096123 (+)
G67219 NA non-coding downstream 85555 36120895 ~ 36128995 (+)
G67263 NA non-coding downstream 222366 36257706 ~ 36257913 (+)
G67326 NA non-coding downstream 571257 36606597 ~ 36609794 (+)
G67152 NA other upstream 4046 35871423 ~ 36023264 (+)
G67145 NA other upstream 173149 35841534 ~ 35854161 (+)
G67146 NA other upstream 175254 35840874 ~ 35852056 (+)
LOC120560625 cep120 other upstream 478079 35522665 ~ 35549231 (+)
LOC120561428 fam163b,LOC103374717,LOC102797860,LOC101061299,LOC102298266,LOC101485828,LOC104964271,LOC102215914 other upstream 967679 35046844 ~ 35059631 (+)
trpm3 trpm3,LOC103470491,LOC103145554,LOC106928040,LOC101476865,LOC100708457 other downstream 206239 36241579 ~ 36492695 (+)
LOC120560081 NA other downstream 442458 36477798 ~ 36481311 (+)
LOC120560165 LOC104964460,LOC103362321 other downstream 1682563 37717903 ~ 37728705 (+)
si:ch211-214j8.12 NA other downstream 2274263 38309603 ~ 38323496 (+)
nkx6.3 nkx6-3,LOC102787307,LOC104940825,LOC102218504 other downstream 2320263 38355603 ~ 38407523 (+)

Expression


Co-expression Network