XLOC_005182 (exoc6)


Basic Information

Item Value
gene id XLOC_005182
gene name exoc6
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 8968275 ~ 9087566 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00009999
ATGGCGGAGAGCGAGAGCTTGGAGACTATCACCGAACATGAACGAATATTACAAGAGATCGAGAGCACGGACACTGCGTGTCTGGGGCCGACTTTACGatCTGTTTACGATGATCAGCCCAACGCACACAAAAGGTTTATGGAGAAGCTTGATGCCAGAATACGTAACCACGACAGAGAGATTGAAAAAATGTGCAACTTTCATCATCAGGGATTCGTCGACGCCATCACAGAACTGCTGAAGGTCCGAGCAGATGCTGAGAAACTGATGGGCCAAGTGAGCGACACCAACCGAAGACTTCAAGACGCCGGACGGGAGGTGACGGCCCAAACCGAGGAGGTCATCCGCTGCCGGGTTCAGCAGAGGAACATGGCCACCACCGTGGAGAAGTTGCAGCTCTGCATTCCCGttctggAAATGTACAGCAAATTGAAGGAGCAGCTTGAATCAAAAAGATACTACTCTGCACTGAAAACCATGGAGCAGCTAGAAAACATTTATATTCCCAGAGTGAGCCAGTACAGGTTCtgccagatcatggctgagactCTCCCAAAACTCAGAGAGGAGATTAAAGAGATCTCCATGTCTGATCTGAAAGACTTCTTAGAAAGTATCCGAAAGCACTCAGATAAGATTGGGGAAACCGCAATGAGACAGGCTCAGCAGCACCGTACGTTCAACAGTGCAGTTCAGAAGCAGGTCACTCTGAGTTGTGCCAAACCTCTGTATGGGCTAAATGGCCGAACGCCCCTCCATCACAACGGCTTAAGCACAGACACAGCAGAGGAAGAAGAGATAGATGAGGAGGTCTTGACGGCTCAGGATCTGGTGGACTTTTCGCCGGTCTACCGATGTCTCCACATCTACACTGTTTTGGGAGACAGAGAGACATTTGAAAATTACTATAGGAAACAAAGGAAAAAACAAGCAAGACTTGTACTACAGCCTCAGTCTAACATGCACGAAACAGTGGAGGGCTACAGGAAGTACTTTAATCAAATTGTTGGGTTTTTTGTGGTGGAGGATCACATATTACACGCCACACAAGGCCTGGTGACCAGAGCCTTCACCGACGAGCTGTGGAACATGGCGCTGTCCAAAATCATCGCAGTTCTCCGCACACACTCTTCCTACTGCAACGATCCTGACCTGGTCCTAGAACTGAAGAACCTGATAGTTATTTTTGCAGACACTTTACAGGGTTATGGCTTCCCTGTGAACAGACTTTTTGACCTGTTGTTTGAGGTTCGAGATCAATACAATGAAACATTGCTCAAGAAATGGGCCTTGGTGTTCAGGGATATTTTTGAGCAGGACAACTACAGCCCCATTCCTGTGGATACTGAAGAGGAGTATAAGGCCGTGGTCAGTCGCTTTCCCTTCCATGATGCAGAGATCGAAAAGCAACAATTCCCAAAGAAGCTGCCCATGTCCCAGTCAGTGCCTCAGATCTACTCTCAAGTGAAGGAGTTTATTTATGCCAGCTTGAAGTTCTCCGAGTCACTCCATCGCAGctCAACCGAGATCGACGACATGCTCCGTAAATCCACCAACCTGCTGTTGACGAGGACCTTGAGCAGCTGCTTACAAAACCTCATCAAAAAACCACACATTGGATTAACAGAGCTTGTTCAAATCATCATCAACACCACCCACTTAGAGCACGCATGTAAATACCTGGAGGATTTTATCACGAACATCACCAATGTTTCCCCGGAAACGGTTCACACCACAAGACTTTACGGGCTTTCCACCTTCAAGGATGCCAGACATGCAGCTGAAGGGGAAATCTACACTAAACTCAACCAGAAGATCGACGAGTTCATTCAGCTGGCGGATTATGAATGGGGAATGGCGGAGTCGGATGGCAGGGCCAGCGGCTACCTCATGGACCTCATTAACTTCCTGCGCAGCACCTTCCAGGTCTTCACCCACCTTCCGGGTAAAGTGGCACAGACGGCGTGTATGTCGGCCTGTAAACATCTGGCCACGTCACTGATGCAGATGCTGCTGGACACTGAGCTCAAACAGATCAGCATGGGAGCCATTCAGCAGTTCAACCTGGATGTTATACAGTGTGAATTGTTTGCCAGTTCAGAGCCTGTACCAGGATTCCAGGGGGACACGCTGCAGTTGGCCTTTATTGACCTCCGACAGCTCCTAGATCTGTTCATGGTGTGGGATTGGTCCACGTATCTGGCAGACTACGGGCAGCCAACCTCAAAGTACCTGCGGGTGAACCCATCCACTGCGCTAGCACTTTTGGAGAAGATGAAAGACACGAGTAAAAAGAACAACATCTTCTCCCAGTTCAGGAAGAATGATCGCGACCGGCAGAAGCTGATCGAGACTGTGGTGAAGCAGCTGAGAAGTCTGGTCAATGGCATGTCCCAGCATTCCTAGAGTCGTCCACATGAACTCCAAACACTGGGTTTGACAATATAACTTATAAATTAGATTTTCTTTTCATTGGCCCccccttgttttttgttttgctcaaAATCCAGTAACTCACTGTAAAGTAAGAACTCTCCGAAAAGTACCGTGGTATATATTTTGACTGCATCCTCCATGTCTTCTGCCAAAATATTCACCACTGTAGGCTAATAATGTAAATATCGGGCAAagatgaagaaagaaaaaaaagaagtgaacAGAAGTTATGCAGTAattttttgtaatgtatttttaaaggttGAGAATTATGTTTTGTACGTTGTGAAAGTGCAATGACTCTAACACTACacttgagagagtgtgtgtgcgtgtgtgtgactgCTGATCGGTCATATTGCAACCTGTATGAAATTCTCCCTAGCGTACCATGGATGAAGtttttattgtacatatttttaaatatatttaactctCCTATGGAATCATGCTTCCCATGGGTCTGCCTTGAGTTGAGTTTGACTCACATTAGGTAAGTCATCAATGCTAAAAACATTTGCATGAGAGTGCTTCGTTTTTATTTCGCTTTCAAGTCGACAGGCTTcaaacaaaagaatctaaaacTGTCGGCTCCGTTTGAAGGAATGTTGCACAAATGCGCCAcagaattatatttaattttaatttcctcAGGGTGAATTGAAAGCTTTGGGTTCAAATGCTTTAGTATTCtttagatttcttttttattattaaaatgagcaATAATTGGTCCAGCTACAGAGAAACGTTAGCTTCATTTCATAGTTTCAACCTATTTTGTTTTCTTCAATTGATTTTCCTGGGCATTTTTGCACTGATTAAAAGATTATTTAAGTTTGCCTTTCAACAAGCAACTGTATATGCTAATGTATTTAAATGACCATTGTATATACCACACTATTTTGTTAAAATTGGGCGGGAAAAAATGGAATGTAAAGATAAAACTTCTGTCGTTAGCTCTGAGTGGTCCCATATGTACGTTTCCTGTGATCTCACGACTGTAACGACACTAATTCTGGTTCTGCTTTAAAATAACTCTCATGACCTGCTTAACAAATCAGTAGTTGCGTTATGTTccgatattaaaatatattaaatgaagacattttgaatatgcattaactaatgatatGTTAAGCATTGTGTAATGTTTGTTATAATATTACTGAAGGTTAATATGAAGTGTAACCCTGATGAGGATCACCATATCCCAAAGTCTCCCCCTGCATTACCTGGAGTTCCTCAAACCCAAGTGACTTCAGATGTTTTCAAGGTCCACTCATTTTTATTTGTGTGctttaataaaatatgatcacaAAAATatagttgttgttggtgttgcTGTTTTCTGCCTAATGT
>TCONS_00010000
GGAAACACAGTTCAAACCAGCACACAGACCATCATGTACGACAGCAGCAGCAGCCTCAAGATCCCCAGCAGTCCCCAAGAAgaggacaaagctgaaggaaaagtcTATGGGAATGTTTTTGCAGAACTGGAATCAGTAGATCTGCCGCTGGGAACGAGTTTAAGatCTGTTTACGATGATCAGCCCAACGCACACAAAAGGTTTATGGAGAAGCTTGATGCCAGAATACGTAACCACGACAGAGAGATTGAAAAAATGTGCAACTTTCATCATCAGGGATTCGTCGACGCCATCACAGAACTGCTGAAGGTCCGAGCAGATGCTGAGAAACTGATGGGCCAAGTGAGCGACACCAACCGAAGACTTCAAGACGCCGGACGGGAGGTGACGGCCCAAACCGAGGAGGTCATCCGCTGCCGGGTTCAGCAGAGGAACATGGCCACCACCGTGGAGAAGTTGCAGCTCTGCATTCCCGttctggAAATGTACAGCAAATTGAAGGAGCAGCTTGAATCAAAAAGATACTACTCTGCACTGAAAACCATGGAGCAGCTAGAAAACATTTATATTCCCAGAGTGAGCCAGTACAGGTTCtgccagatcatggctgagactCTCCCAAAACTCAGAGAGGAGATTAAAGAGATCTCCATGTCTGATCTGAAAGACTTCTTAGAAAGTATCCGAAAGCACTCAGATAAGATTGGGGAAACCGCAATGAGACAGGCTCAGCAGCACCGTACGTTCAACAGTGCAGTTCAGAAGCAGGTCACTCTGAGTTGTGCCAAACCTCTGTATGGGCTAAATGGCCGAACGCCCCTCCATCACAACGGCTTAAGCACAGACACAGCAGAGGAAGAAGAGATAGATGAGGAGGTCTTGACGGCTCAGGATCTGGTGGACTTTTCGCCGGTCTACCGATGTCTCCACATCTACACTGTTTTGGGAGACAGAGAGACATTTGAAAATTACTATAGGAAACAAAGGAAAAAACAAGCAAGACTTGTACTACAGCCTCAGTCTAACATGCACGAAACAGTGGAGGGCTACAGGAAGTACTTTAATCAAATTGTTGGGTTTTTTGTGGTGGAGGATCACATATTACACGCCACACAAGGCCTGGTGACCAGAGCCTTCACCGACGAGCTGTGGAACATGGCGCTGTCCAAAATCATCGCAGTTCTCCGCACACACTCTTCCTACTGCAACGATCCTGACCTGGTCCTAGAACTGAAGAACCTGATAGTTATTTTTGCAGACACTTTACAGGGTTATGGCTTCCCTGTGAACAGACTTTTTGACCTGTTGTTTGAGGTTCGAGATCAATACAATGAAACATTGCTCAAGAAATGGGCCTTGGTGTTCAGGGATATTTTTGAGCAGGACAACTACAGCCCCATTCCTGTGGATACTGAAGAGGAGTATAAGGCCGTGGTCAGTCGCTTTCCCTTCCATGATGCAGAGATCGAAAAGCAACAATTCCCAAAGAAGCTGCCCATGTCCCAGTCAGTGCCTCAGATCTACTCTCAAGTGAAGGAGTTTATTTATGCCAGCTTGAAGTTCTCCGAGTCACTCCATCGCAGctCAACCGAGATCGACGACATGCTCCGTAAATCCACCAACCTGCTGTTGACGAGGACCTTGAGCAGCTGCTTACAAAACCTCATCAAAAAACCACACATTGGATTAACAGAGCTTGTTCAAATCATCATCAACACCACCCACTTAGAGCACGCATGTAAATACCTGGAGGATTTTATCACGAACATCACCAATGTTTCCCCGGAAACGGTTCACACCACAAGACTTTACGGGCTTTCCACCTTCAAGGATGCCAGACATGCAGCTGAAGGGGAAATCTACACTAAACTCAACCAGAAGATCGACGAGTTCATTCAGCTGGCGGATTATGAATGGGGAATGGCGGAGTCGGATGGCAGGGCCAGCGGCTACCTCATGGACCTCATTAACTTCCTGCGCAGCACCTTCCAGGTCTTCACCCACCTTCCGGGTAAAGTGGCACAGACGGCGTGTATGTCGGCCTGTAAACATCTGGCCACGTCACTGATGCAGATGCTGCTGGACACTGAGCTCAAACAGATCAGCATGGGAGCCATTCAGCAGTTCAACCTGGATGTTATACAGTGTGAATGTGAGTAGGATCAATTACTGCACATTTACAATGCCAATTCAATGCAGCCTTTATACAGTTGCATACCCCTCACCATGGCTGATGCTGAGCACCTCTCTATAAATGTAACTAGTCGTCACAACGACTCCTAGCACATGCTCTTGGTAGCTGTGACCAATGCGGGCGTAACCGAGAGCCGGTTAAACCTATTGGAGGGAGTGTCCTGTGAAGTAGCTCTAGAtgaaaactgttgttttgtttttatcttataattaaagttgttgcttGTTCGCCGATTCCCGCCTCAGAATGAgctagttttagctacttgtacattaaggtagcgttaaaaaaaacaaaacacccgcaaAGAAACATGACACAGACGAacttactgccagctagtgtattggaagtgttattgaagagcaacacaaaacaatgcacagaagtataaatgcatgactacgcACAAGGTAGGCACCGTGGATAACGCCAaacactcgacgcagaagtataaatcagccttaaggcctTATCGGATTTGTCAAATTTggataaacaaccaatgcataaaatatatgcaattTATTACTCATGTCTGTGATATGAACTGTATATTGAATATACTGTTATCGCAATAATGACATTGTACAGCACGTCTTGGTACACAGCCTTGTACATTTGTCTTTTTGGCTGATTTTTGCATGCATCTTTGCCTCAAATCAAAGATTTGTatcttgttggtttgtttgtttttgtaaatattaaattaaaattaattctaGCACCACACTAATCAAAAAGTGTTTAAGGACTATTTGCGGAAAAACAAACCTCAGAATCGAGCATTCGAGCAATTCAAAGTGTTGTGTAATCCTGAGTTGCCAGGTTTTTTACAACAAAACTATATCAATATCCTGCAAAAAAATTGCCAAACACTATCCCAATAATTCAATAATATCAAAAACTCCTATCTTATTCTTAAAACACAGATTATACATCACTGTATGCATTTTGAATGGTTTCTTCTTTTAAATCGTTATTTTTTTGAATAtctatttattgaattttttgcatttacaatgTAAAGTATTACATTACCCCTACCCTACCACAACCAcacattgaaagaaaaaaaaggggacaaaagataaaaaataaaatatacatcatTCCAGAGTGAGAAAGCAGAGTGTTCCATATTTGTTCAGTCCATATGTTATCATTCAACATAAGAGGCTTGGCAACATCCAAAAGAAGGAATATACAAAAGAGGGGCATcttgatacaaaaaaaataaaaataaatgaataaaatttaaaaattaaaattcaataataagaaataaaaaaaaattataatgaaaaaCTAAACGGTTATAATCCTCTTAAATTACAAAACCTTCCAGATATATCAAAGTTGACAGTGAGGCAATACCTTGTCATATTTTTAGTCAATATGTAATTATTTGACATGAAAAGTTTGGTAACATCCAAAGAGTACAAAATAgaagtaacataaaaaataaaataaatagataatttttttataaaggcCAGGGAGttcttcaaaatatttctttaaattaacTGTATAGTAATATTCTGTTccatccagcaaaaaaaaaaaaaaa
>TCONS_00010001
GGAAACACAGTTCAAACCAGCACACAGACCATCATGTACGACAGCAGCAGCAGCCTCAAGATCCCCAGCAGTCCCCAAGAAgaggacaaagctgaaggaaaagtcTATGGGAATGTTTTTGCAGAACTGGAATCAGTAGATCTGCCGCTGGGAACGAGTTTAAGatCTGTTTACGATGATCAGCCCAACGCACACAAAAGGTTTATGGAGAAGCTTGATGCCAGAATACGTAACCACGACAGAGAGATTGAAAAAATGTGCAACTTTCATCATCAGGGATTCGTCGACGCCATCACAGAACTGCTGAAGGTCCGAGCAGATGCTGAGAAACTGATGGGCCAAGTGAGCGACACCAACCGAAGACTTCAAGACGCCGGACGGGAGGTGACGGCCCAAACCGAGGAGGTCATCCGCTGCCGGGTTCAGCAGAGGAACATGGCCACCACCGTGGAGAAGTTGCAGCTCTGCATTCCCGttctggAAATGTACAGCAAATTGAAGGAGCAGCTTGAATCAAAAAGATACTACTCTGCACTGAAAACCATGGAGCAGCTAGAAAACATTTATATTCCCAGAGTGAGCCAGTACAGGTTCtgccagatcatggctgagactCTCCCAAAACTCAGAGAGGAGATTAAAGAGATCTCCATGTCTGATCTGAAAGACTTCTTAGAAAGTATCCGAAAGCACTCAGATAAGATTGGGGAAACCGCAATGAGACAGGCTCAGCAGCACCGTACGTTCAACAGTGCAGTTCAGAAGCAGGTCACTCTGAGTTGTGCCAAACCTCTGTATGGGCTAA
>TCONS_00010002
CTCCATGTCTGATCTGAAAGACTTCTTAGAAAGTATCCGAAAGCACTCAGATAAGATTGGGGAAACCGCAATGAGACAGATATCTGCTTGCAAAGTGCTTACAAGTGTGAATCATCagcacttcaaatcatcagagaGTAGCACTATATAAATGCTATGAGTATAAGTTTTTTTTCTGATCATACGGAAAGGATTGTTTGAAAGCCCACTCACTGGTGTGGaacacactcagaattgcacaatgttttatGGGGTGCTTATAAAaatgtgtctggtgcatatgaaaAATTGTGTcacttacaggtggtttgtcaaatcATTCCACCTGCATGAAACACCTAATGTCTTTTTGTA
>TCONS_00010003
ACTGCGTGTCTGGGGCCGACTTTACGatCTGTTTACGATGATCAGCCCAACGCACACAAAAGGTTTATGGAGAAGCTTGATGCCAGAATACGTAACCACGACAGAGAGATTGAAAAAATGTGCAACTTTCATCATCAGGGATTCGTCGACGCCATCACAGAACTGCTGAAGGTCCGAGCAGATGCTGAGAAACTGATGGTACGTGCGAATCATTATCAAAATCATGTTAGCGATTTAAAGCTACATTAATAGATAttagcagggcttgacattaagttttttgatcaccagccactgtggctagtagatttccaacctCACTTGCCACTCAACATTTTCATTGGCCACAATTTTGTtggaataatttattttatatgcataaatttgactttggcatgctagaATTACTTAATTTAGACGCTGTGTTATGCACATGCCttaataatttaactttttttgtgtatGAACTTGCTTAATGTGCATGAGCgaatgggttgtggtttcatggtgtcgcattgcaattcatttttatttcacaggacttttcagggctcaaaattaaggatttgcCAAATTTatttctgaccacaccaaaaaaaaaacgttttatttcTTATCCATAAATGCTAAATAAtgtcaaaacatacaaaatatagctgtatttGCTCTTTTTATTCAACAGCAacttaaaaaacaattacaattttaaaaacaattattgccATGTATCTAAAACTATCTCTGTCCAGGCTAAagtctctcagatcaccagttaactgtacatacatagtgagttaatctcctattaaagcaatgttgttgtaaaaatgttaattaaaccaaattaacaaaaataatcgtaagc

Function

symbol description
exoc6 Predicted to be involved in Golgi to plasma membrane transport and exocytosis. Predicted to act upstream of or within vesicle docking involved in exocytosis. Predicted to be part of exocyst. Predicted to be active in membrane. Is expressed in nervous system; optic primordium; optic vesicle; ventral mesenchyme; and ventral mesoderm. Orthologous to human EXOC6 (exocyst complex component 6).

GO:

id name namespace
GO:0006887 exocytosis biological_process
GO:0006893 Golgi to plasma membrane transport biological_process
GO:0006904 vesicle docking involved in exocytosis biological_process
GO:0000145 exocyst cellular_component
GO:0016020 membrane cellular_component
GO:0003674 molecular_function molecular_function

KEGG:

id description
ko04131 Membrane trafficking

ZFIN:

id description
ZDB-GENE-040426-2511 Predicted to be involved in Golgi to plasma membrane transport and exocytosis. Predicted to act upstream of or within vesicle docking involved in exocytosis. Predicted to be part of exocyst. Predicted to be active in membrane. Is expressed in nervous system; optic primordium; optic vesicle; ventral mesenchyme; and ventral mesoderm. Orthologous to human EXOC6 (exocyst complex component 6).

Ensembl:

ensembl_id ENSDARG00000020521

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00009999 False 3798 mRNA 0.44 22 8968275 9084640
TCONS_00010000 False 3767 lncRNA 0.42 19 8996035 9087566
TCONS_00010001 False 805 mRNA 0.49 7 9049339 9087566
TCONS_00010002 False 354 processed_transcript 0.38 2 9049532 9051178
TCONS_00010003 True 865 lncRNA 0.35 2 9063675 9084568

Neighbor

gene id symbol gene type direction distance location
XLOC_005181 cyp26a1 coding downstream 9922 8954761 ~ 8958353 (-)
XLOC_005180 CR354554.1 coding downstream 107968 8860193 ~ 8860307 (-)
XLOC_005179 jmjd1cb coding downstream 150276 8581875 ~ 8817999 (-)
XLOC_005178 NA coding downstream 393250 8573933 ~ 8575025 (-)
XLOC_005177 CR932364.1 coding downstream 457090 8509640 ~ 8511185 (-)
XLOC_005183 adam8b coding upstream 9397 9096963 ~ 9132682 (-)
XLOC_005184 CR854953.1 coding upstream 29486 9117052 ~ 9117178 (-)
XLOC_005185 NA coding upstream 139820 9227386 ~ 9237794 (-)
XLOC_005186 pth3r coding upstream 169891 9257457 ~ 9294819 (-)
XLOC_005187 CR457459.1 coding upstream 257798 9345364 ~ 9345485 (-)
XLOC_005175 NA non-coding downstream 487567 8477459 ~ 8480708 (-)
XLOC_005174 CR354434.1 non-coding downstream 524254 8443904 ~ 8444021 (-)
XLOC_005173 NA non-coding downstream 573630 8388330 ~ 8394645 (-)
XLOC_005195 AL732629.1 non-coding upstream 560662 9648228 ~ 9648345 (-)
XLOC_005196 AL732629.2 non-coding upstream 582361 9669927 ~ 9671137 (-)

Expression


Co-expression Network