XLOC_005175


Basic Information

Item Value
gene id XLOC_005175
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 8477459 ~ 8480708 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00011099
ctttaagataAGACTAGAATTTTTAGATTTCTGCTTTCCTTTAATAAATGTTCATCATATGTAGTGGATAACAGTTACaggaacatgattaacttagtttaatatgtTACAAATAACGAAACAATCTATGTTGTCATGCCTTATTGACCATATACGTATAACAGTGTAATAATAACTGTTCATTATCACTGTTTTCATGGATGCAAGTATGAAATTGACATTAAGCAATCAATTTAAATCTAACCTTGGAGATTTTCTTGAACATAAGACAAAGTCAaatgatttaaatacattttaatatacttCA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00011099 True 307 lncRNA 0.27 2 8477459 8480708

Neighbor

gene id symbol gene type direction distance location
XLOC_005174 CR354434.1 coding downstream 33438 8443904 ~ 8444021 (-)
XLOC_005173 NA coding downstream 82814 8388330 ~ 8394645 (-)
XLOC_005170 NA coding downstream 404196 8003509 ~ 8073263 (-)
XLOC_005172 tmem26b coding downstream 406490 8064029 ~ 8070969 (-)
XLOC_005171 NA coding downstream 430986 8039984 ~ 8046473 (-)
XLOC_005176 egr2b coding upstream 3130 8483838 ~ 8504278 (-)
XLOC_005177 CR932364.1 coding upstream 28932 8509640 ~ 8511185 (-)
XLOC_005178 NA coding upstream 93225 8573933 ~ 8575025 (-)
XLOC_005179 jmjd1cb coding upstream 101167 8581875 ~ 8817999 (-)
XLOC_005180 CR354554.1 coding upstream 379485 8860193 ~ 8860307 (-)
XLOC_005164 FP102277.1 non-coding downstream 974361 7502962 ~ 7503098 (-)
XLOC_005184 CR854953.1 non-coding upstream 636344 9117052 ~ 9117178 (-)
XLOC_005185 NA non-coding upstream 746678 9227386 ~ 9237794 (-)
XLOC_005187 CR457459.1 non-coding upstream 864656 9345364 ~ 9345485 (-)

Expression


Co-expression Network