XLOC_005172 (tmem26b)


Basic Information

Item Value
gene id XLOC_005172
gene name tmem26b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 8064029 ~ 8070969 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00009988
GAAAGCTTCTACTTTTCTCACACAACCTAtcctaaaaaagtattttaaaagaaagCATGTTTGTCAAATTTATCTGCGCTATAGTCACGAGGGCACTGTTTATCCTAGTGTCCCTCATCGGTGTGTGGAGGGTGACATGGGTGAAAAACAATCCTTTATACTGGTTTCTGACTATCCTTTATCTACCTCTCGTGGTGGAAATGATTTTAACTCTGAGAAGAAGAAAAGGGAAGGATTACAAATGGTTTTCTCCAGCAATACTGTTTTTCCTTATCAGCATCATACCAACCATATGGATCCTTGAGTTGCACCATGAGCAAAACAAATCAAGTGATACTAAGTGCACTAAACTGGATTCATCTGAAGACATCAGAGCTTTTCTTCACGAGTGGAAAAATTCCACCAACGGATCTGTGAATACACAGGATCCTCTGAAATTACTGTCAACGGTTTGTGCCAATGACTGGATCCTGGCTCTTCAACAAATCGTTCTGATTCTGCTAATAGTGGGAAAATGGATGCTACCGATCGCCGGAGGCGTCACGAGAGATGAAATGTCCCAGTTGTTGCTCATCTTTGTGGGCACAGCTGCTGATATCCTCGAGTTTATCAGTGAAACGCTGTCTGATGTGAAcgaGGAGAGTCTGTCATTTGTGTGTGTTATTCTTGTGGTCTGGACATTGAGCATGCTACAGTTTCCACTGCATTTCTCAGTGGTGAACACCAGAGCAGAAGATGTTTCTGTAAGCCAGGATGGCTCGCTGTACTCAAGGTACAGGACGGATATATGGAACATTGGTGGAAGTCTATTTCTTCAGGACGGGCCTTTCTTTGTTGTCCGACTTACAGTTATGATGGTTTTTTCCAACTTTCATCAGATGCTGGTGTTTTTTACCCTTAAAAACTTTCTGGTAGTGATGCTTAACATCTACAGGCTGTGGGTGATTTGGATTGATAGCAAATCGTAACGTGTTTGAACAGAATCTCGTCTGagctaaaacaaacaaagcaaaacagtgATGATTCATTGGCAGTAACGGTTTTTTAGAACCGACATGGTGCCAGTTACAGAGAAAAGTGTATTTTCGTTAAGCAATTTGACTTTGACAAGGATCAACAATCCATGCATCCATGTTATATTATTAAGAAGGCTGTGAAAgctaacacataataataattaaatgtagcTTGTAAAT

Function

symbol description
tmem26b Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM26 (transmembrane protein 26).

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-080204-66 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM26 (transmembrane protein 26).

Ensembl:

ensembl_id ENSDARG00000014682

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00009988 True 1196 mRNA 0.41 6 8064029 8070969

Neighbor

gene id symbol gene type direction distance location
XLOC_005171 NA coding downstream 17556 8039984 ~ 8046473 (-)
XLOC_005169 ank3b coding downstream 209813 7757663 ~ 7854216 (-)
XLOC_005168 CABZ01050062.1 coding downstream 353466 7699632 ~ 7710563 (-)
XLOC_005167 ank3b coding downstream 408707 7653863 ~ 7655322 (-)
XLOC_005166 ccdc6b coding downstream 424909 7609928 ~ 7639120 (-)
XLOC_005173 NA coding upstream 317361 8388330 ~ 8394645 (-)
XLOC_005174 CR354434.1 coding upstream 372935 8443904 ~ 8444021 (-)
XLOC_005175 NA coding upstream 406490 8477459 ~ 8480708 (-)
XLOC_005176 egr2b coding upstream 412869 8483838 ~ 8504278 (-)
XLOC_005177 CR932364.1 coding upstream 438671 8509640 ~ 8511185 (-)
XLOC_005164 FP102277.1 non-coding downstream 560931 7502962 ~ 7503098 (-)
XLOC_005163 NA non-coding downstream 622722 7406088 ~ 7441307 (-)
XLOC_005162 NA non-coding downstream 741078 7303565 ~ 7322951 (-)
XLOC_005157 NA non-coding downstream 921199 7142467 ~ 7142830 (-)
XLOC_005178 NA non-coding upstream 502964 8573933 ~ 8575025 (-)
XLOC_005180 CR354554.1 non-coding upstream 789224 8860193 ~ 8860307 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000047_01354406_01355790 NA coding CI01000047 null 1353882 ~ 1355828 (+)