trnag-ucc_26


Basic Information

Item Value
gene id trnag-ucc_26
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047613.1
NCBI id CM018559.1
chromosome length 22090854
location 21537647 ~ 21537718 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>trnag-ucc_26
GCGTTGGTGGTATAGTGGTTAGCATAGCTGCCTTCCAAGCAGTtgacccgggttcgattcccggccaacGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnag-ucc_26 True 72 tRNA 0.57 1 21537647 21537718

Neighbor

gene id symbol gene type direction distance location
LOC117599737 LOC106576489,LOC106931447 coding upstream 22586 21511795 ~ 21515061 (+)
LOC117599738 LOC101884462,LOC107081104,LOC101885893 coding upstream 27536 21505759 ~ 21510111 (+)
LOC113524832 LOC108273546,LOC108261406,LOC108273545,LOC108257668,LOC108270753,LOC108270747,LOC108273691,LOC108273692 coding upstream 56018 21463826 ~ 21481629 (+)
LOC113524628 LOC108273545,LOC108270753,LOC108273692,LOC108257668,LOC108273546,LOC108260129,LOC108273691,LOC108264971 coding upstream 89011 21418861 ~ 21448636 (+)
LOC113524812 NA coding upstream 204991 21327371 ~ 21332656 (+)
trnag-ucc_27 NA coding downstream 43166 21580884 ~ 21580955 (+)
LOC117599739 LOC101884462,LOC107081104,LOC101885893,LOC107084730 coding downstream 69913 21607631 ~ 21610224 (+)
trnag-ucc_29 NA coding downstream 89649 21627367 ~ 21627438 (+)
ylpm1 ylpm1,LOC107729078,LOC107685771,LOC107695985 coding downstream 243773 21781491 ~ 21806014 (+)
LOC117599735 NA coding downstream 263349 21801067 ~ 21805691 (+)
trnag-ucc_25 NA non-coding upstream 33373 21504203 ~ 21504274 (+)
LOC117599740 NA non-coding upstream 127526 21382514 ~ 21410121 (+)
LOC117599745 NA non-coding upstream 270914 21266230 ~ 21266733 (+)
G298979 NA non-coding upstream 337789 21127504 ~ 21199858 (+)
G298958 NA non-coding upstream 454813 21082534 ~ 21082834 (+)
G299182 NA non-coding downstream 8680 21546398 ~ 21684428 (+)
LOC117599746 NA non-coding downstream 45060 21582778 ~ 21583715 (+)
trnag-ucc_28 NA non-coding downstream 63148 21600866 ~ 21600937 (+)
G299224 NA non-coding downstream 143395 21681113 ~ 22048673 (+)
G299225 NA non-coding downstream 145594 21683312 ~ 21683762 (+)
G299088 zgc:86709,ACTC1,actc1,LOC108414322 other upstream 201600 21333265 ~ 21336047 (+)
flrt2 flrt2,LOC108258011 other upstream 698957 20825689 ~ 20838690 (+)
LOC117599696 NA other upstream 1453150 20082506 ~ 20084497 (+)
G298409 NA other upstream 1990913 19401549 ~ 19546734 (+)
G298379 NA other upstream 2247108 19289985 ~ 19290539 (+)
psmc6 psmc6,LOC107668141,LOC107549540,LOC107582103 other downstream 170640 21708358 ~ 21719463 (+)
LOC113525043 NA other downstream 213848 21751566 ~ 21755344 (+)
LOC113525041 LOC108257678 other downstream 428607 21966325 ~ 21972928 (+)

Expression


Co-expression Network