G21


Basic Information

Item Value
gene id G21
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047595.1
NCBI id CM018541.1
chromosome length 35600603
location 13277 ~ 14040 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU25
ctacactgctgtgggagacacacactacactgctgtaggagacacacactatactgttgTAGGAGACACACACTATATTGCTGTAGGagacacacactatactgctgtgggagacacacactacaccgATGTGGGAGAGacacactacactgctgtgggagacacacactacactgctgtgggagacacacactacactgctgtgggagacacacactacactgctgtgggagacacacactacactgctgtgggagacacacactacactgctgtgggagacacacactacactgctgtaggagacacacactacactgctgtaggagacacacactacactgctgtaggagacacacactacactgctgtgggaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU25 True 378 lncRNA 0.42 2 13277 14040

Neighbor

gene id symbol gene type direction distance location
LOC113525472 LOC108436101,LOC107570793,LOC107573903,LOC100711672,LOC101487210,LOC108262683,LOC107745159,LOC107679551,LOC107698181 coding upstream 44252 58292 ~ 85245 (-)
pklr pklr,LOC108262744,LOC108436102 coding upstream 72407 86447 ~ 95080 (-)
LOC113525473 LOC108263488 coding upstream 81492 95532 ~ 104348 (-)
LOC113525476 NA coding upstream 90843 104883 ~ 106528 (-)
clk2b LOC108436103 coding upstream 93583 107623 ~ 117996 (-)
G187 phc1,LOC108270321,LOC108443659 non-coding upstream 199254 213294 ~ 214675 (-)
LOC117597821 NA non-coding upstream 233092 247132 ~ 248138 (-)
LOC117597824 LOC108270753,LOC108261633,LOC108263117,LOC108260129 non-coding upstream 234226 248266 ~ 252164 (-)
G190 NA non-coding upstream 276797 290837 ~ 295782 (-)
LOC117598405 NA non-coding upstream 296424 310464 ~ 329128 (-)
zbtb7b LOC108277650,LOC107565362,LOC108436080,LOC107745148,LOC107570794,LOC107679557 other upstream 7544 21584 ~ 55153 (-)
spag1b LOC108262752 other upstream 110322 124362 ~ 186847 (-)
ptpn6 ptpn6,LOC108263538,LOC107704909,LOC107714609,LOC107724803 other upstream 144583 158623 ~ 166069 (-)
G502 NA other upstream 584741 598781 ~ 599166 (-)
cenpw cenpw,LOC107600551,LOC107668290,LOC107666774,LOC107567752 other upstream 2374608 2388648 ~ 2400257 (-)

Expression


Co-expression Network