trnaq-cug_7


Basic Information

Item Value
gene id trnaq-cug_7
gene name NA
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047595.1
NCBI id CM018541.1
chromosome length 35600603
location 19696365 ~ 19696436 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>trnaq-cug_7
GGTTCCATGGTGTAATGGTTAGCACTCTGGACTCTGAATCCAGCGATCCGAGTTCAAATCTCGGTGGAACCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnaq-cug_7 True 72 tRNA 0.50 1 19696365 19696436

Neighbor

gene id symbol gene type direction distance location
trnaq-cug_3 NA coding downstream 12708 19683586 ~ 19683657 (-)
trnaq-cug_2 NA coding downstream 15899 19680395 ~ 19680466 (-)
trnaq-cug_1 NA coding downstream 19113 19677181 ~ 19677252 (-)
gon4l LOC108267623,LOC108436573,LOC107549236,LOC107597969 coding downstream 32322 19640774 ~ 19664043 (-)
pdia7 LOC108267688 coding downstream 60327 19629636 ~ 19636038 (-)
npr1b npr1b,LOC108273580,LOC103022666,LOC108436575,LOC107741766,LOC107689868,LOC107681586,LOC107717786,LOC106580330 coding upstream 51475 19747911 ~ 19788156 (-)
chtopb LOC108258844 coding upstream 102122 19798558 ~ 19803633 (-)
zgc:171704 LOC108267597 coding upstream 141651 19838087 ~ 19839645 (-)
trim33l NA coding upstream 143689 19840125 ~ 19859322 (-)
dcst2 dcst2 coding upstream 169943 19866379 ~ 19898936 (-)
G10746 NA non-coding downstream 3890 19692221 ~ 19692475 (-)
G10719 NA non-coding downstream 57079 19639054 ~ 19639286 (-)
G10716 NA non-coding downstream 58495 19637639 ~ 19637870 (-)
G10702 NA non-coding downstream 92605 19603418 ~ 19603760 (-)
G10630 NA non-coding downstream 229206 19466940 ~ 19467159 (-)
G10757 NA non-coding upstream 34240 19730676 ~ 19741287 (-)
G10762 NA non-coding upstream 47870 19744306 ~ 19744518 (-)
LOC113542661 NA non-coding upstream 137232 19833668 ~ 19833869 (-)
G10869 NA non-coding upstream 210663 19907099 ~ 19910920 (-)
G10956 NA non-coding upstream 317740 20014176 ~ 20014873 (-)
trnaq-cug_6 NA other downstream 3135 19693159 ~ 19693230 (-)
trnaq-cug_5 NA other downstream 6301 19689993 ~ 19690064 (-)
trnaq-cug_4 NA other downstream 9498 19686508 ~ 19686867 (-)
ccn4b wisp1,wisp1b,LOC107714595,LOC107724778,LOC107587903,LOC107552812 other downstream 148864 19542359 ~ 19547501 (-)
rrnad1 rrnad1 other downstream 864161 18825381 ~ 18832204 (-)
trnaq-cug_8 NA other upstream 3130 19699566 ~ 19699637 (-)
LOC117597712 NA other upstream 6175 19702611 ~ 19703160 (-)
trnaq-uug NA other upstream 49214 19745650 ~ 19745940 (-)
trnaq-cug_9 NA other upstream 50090 19746526 ~ 19746883 (-)
G10832 LOC108267614 other upstream 120041 19816477 ~ 19823683 (-)

Expression


Co-expression Network