dnttip2 (LOC102796155)


Basic Information

Item Value
gene id dnttip2
gene name LOC102796155
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047602.1
NCBI id CM018548.1
chromosome length 30442583
location 10895439 ~ 10902076 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026919639.2
GTCTGGATGGAGTGGATGTTTCAGCTAATCGATTGGTATAGTCTCAGTGCCAGAGGTTCACATGATCTAACCGGAAGTGTGCGCGAGCACGTTCAGCGGCAAGATGGTGGCCACCAGGAGAGGAACACGCGTGAGTTCCCCAGCGAAACACACAAACGATGAAGCCGCAGGAACACCgATATCTACCATCAGAAGTACAAGACGTAGAACAGTGATAGTGACAACGCAGTCCCAATCTGAACAGACCAGTGATTCCCAGCAGGATGAAGCAGAAGAGCAGAACACGGCTCCAGTTGAAACAGCAAGCTCACCAAAAAGGGAAACTAGAAGTTCTAAATGTCGTCCCACAGACAAACAGCCAGAATCCACACATGAAGCAGATGTGTCTGAATCTGAGTCTTGTTGTTCTGTGGCCTCAGATATACAGCTGACTACTCGAAGCAGAAGGAGAGCAACGGTCCGAGCGAAACCTACAGCCGTGGATGAACAGGAGGCATCTAAAGCTGAATCTAGTTCTTCATCATTGGGTAAAACCCCACGCAGATCCACAAGAGGTCAGAAGAAACCCGTTCCTGTTTTAGAGTCCACCACTTCACAGGATGATGAGCACTCTGAGGCTGAGTCTTGCAGCTCTGTGGCATCTCTGTCCACTAGGATCACGAGGAGCCGCAGGAAGCCTGCTGTTGCTCCTGAAGATGCAGCTCACTCAGAGGCAGATTCTTGCTCGTCTGTAGTTTCTGGCCCTCAGGGATCCACTGTCCGCAGGTCCACACGCAGCAGAGTGAAGGTCACCGAGCCGATCCCCATCCACTTGGAGCAAAGTGAAACTGCAGAGGCTTCTGCTGCCTTTGAGCCCAGGAGCACAAGGGCACGCAGAGTCAAAGCAAAGTCTGTTGAGGAAGTCCAGGCTTATGACTCTGAGGGATGTCACTCTGGCCCTAGCTTGAGTCCTAAAAGAACCACTCGTAGTTGGGttgctgattctgattctgaatcagTATCGACTGCGTGCACTTCTCTTGATAGTCCTTGTTCTACACGGGGCAGGGGAACCCCTCGAAGTAGCCGAACTGGCTCAGCTAGTAGCAACCGTGCTGTTCGAGTTCCTAGATCAAGACATGTCAGGGTCGCATTAGATGTTCTTAATATTCCTTCATCGGTCTCCAAAAGCGTCAAAAAGAACAGTGAAGAGAATGAACCTGAGAAAGACCAGGCTGAAACTACAGAGGATATTCCTTGCCTGTCTGTAAGCACAACAAAGTCTGACACAGAGGATgtagaggaggtggaggaggacgcaaataataaaacagttattGCCGCAGATCAAGAATGTTCCATTGCTGCGGACAATAATGGGGATCTTACTCTAACTTTTGATGAGGGTGAGGCTGAAGTGGCTAAACCTGAGAGCAGACGAGCTATTTCTTCTGCGACTGAGAAGGATGTTGAGAAATGTCGGGAGATTGCAGATGAGGCCATGGAAACACATGAGCCCATCTCTGTGCAGGAAGTCCAAGCCATGGAAGAGGAATCAAGTTCCACATCTGTGACGCCCCAAAGGAGTGTCACAGGGACTAAAGAGGATCAGTCAAACCTCGCAGAAGAACCTGATACTGAAGTCCAGCAAAGCTCTGATCCAGACAAACATGAAGAGAATTTAAAAGTACCTGGTGTGATGGAAGACAGGACTAACGAGGAAGGACCTTCATCAAGCTCAGAAGTGTCTAAGATGAGTGTTGAGAAGACCAAGCCTGTGAAGGGATGTGTCAGCTTGCTGGACAGCAGTGAGGATGAGGagagtgatgatgatggactCTCAGTGGATGGAGGCAATGACGAGGCTGGGGACTTGGACAGTGAGGATGAAATGTGCTGTTCTGAGGATCAGTCAGGTCCCTCCGGTGCACCAGACTCCCTCTCAGGTAACGGGCTGTTTGTTATTGACGCGCGCCCTGGATGTCAGCCGAGTGAGAAGTACTATATTGATACTACACAGAATGAAGGAGATGACAACGTCAAGGACTCCAAAGCTGTTGAGGACGAAGAGGATTTTGTTGACGAGGAGGgagatgatgaggaggaggaggatgaagactCAAAAGTACTCTTCACTACTAGGAAGCCGGCACTgAATGAATTATCCAGTTCTATTGACCCAGGGTTGAAAGTAAAGACTCTTGGTGGATTATATATCAACTTCGATGGCAGCAAATCCAAATCTGTCTCTGACAACCTGAAAAAGCTGAAAGATCAGAAGAATCAAGATGAGTTGCTGAAGAAGAGTGTGATTGTTGCAGACTTTGAAAAGAAAGACACTGTGCCACCATACAAGGAATCCAAACATGCTGCTAAATTAAAGCGCAGGGAGGAGAGAGCTAAGACCACAGGAGATGGCTGGTTCAACATGAGAGCTCCTGAATTAACAGAAGACCTGAAGAATGATCTCAAGGCCCTACAGATGCGTTCAGCCATGGACCCAAAGCGCTTTTACAAGAAGAATGACAGAGCAGGATTTCCCAAATACTTCCAAGTTGGAACGGTGGTTGATAACCCCATAGACTTCTACCATTCCCGAATTCctaagaaagagaggaagaggactATTGTGGAAGAATTGCTTGCTGATGCAGAGTTCAGAAgTTTTAACAAGAGGAAGTATACAGAGATCATGGCAGAAAAAGCAGCAGCGGCAGCTggaaagatgaataaaaagaagcataaatttcataaaaagaaatgatAAGCTTGACTTGTGCCACCAGTTTGGAGGATTCGACATGACAGTTCTCATTTAAGACCTCTCACAGACTGTTCACCAATAAATCATGTACACCA

Function

NR:

description
deoxynucleotidyltransferase terminal-interacting protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026919639.2 True 2838 mRNA 0.48 8 10895439 10902076

Neighbor

gene id symbol gene type direction distance location
gclm gclm,LOC107699464,LOC107599012,LOC107657862,LOC107757997,LOC107603255 coding upstream 1388 10883535 ~ 10894051 (+)
slc5a9 slc5a9,LOC107757988 coding upstream 12435 10875410 ~ 10883004 (+)
fnbp1l fnbp1l,LOC107757999,LOC107599010 coding upstream 104525 10743725 ~ 10790914 (+)
kazna kazn coding upstream 214170 10631481 ~ 10681269 (+)
slc16a1b slc16a1,slc16a1b,LOC108425094,LOC107669643,LOC107717534,LOC107711946,LOC107591766 coding upstream 353667 10513439 ~ 10541772 (+)
elavl4 elavl4,LOC107707578,LOC107699497,LOC106613894,LOC107548120,LOC103028496 coding downstream 317475 11219551 ~ 11288918 (+)
cdkn2c cdkn2c coding downstream 534309 11436385 ~ 11447884 (+)
si:ch211-198n5.11 LOC108265604 coding downstream 686748 11588824 ~ 11596613 (+)
LOC113538016 NA coding downstream 695705 11597781 ~ 11608557 (+)
magoh mgn,magoh,LOC106560432,LOC107387361,LOC101074452,LOC107731141,LOC107549138 coding downstream 794807 11696883 ~ 11699368 (+)
G130492 NA non-coding upstream 32801 10862404 ~ 10862638 (+)
G130459 NA non-coding upstream 132570 10753800 ~ 10762869 (+)
G130412 NA non-coding upstream 346372 10546979 ~ 10549067 (+)
G130415 NA non-coding upstream 370740 10519440 ~ 10524699 (+)
G130285 NA non-coding upstream 748305 10085561 ~ 10147134 (+)
G130608 NA non-coding downstream 6278 10908354 ~ 10908717 (+)
G130609 spata6 non-coding downstream 7817 10909893 ~ 10910207 (+)
G130611 NA non-coding downstream 9088 10911164 ~ 10911375 (+)
G130618 NA non-coding downstream 14261 10916337 ~ 10916625 (+)
LOC113527270 NA non-coding downstream 42581 10944657 ~ 10948346 (+)
mrpl55 mrpl55 other upstream 21313 10870119 ~ 10874126 (+)
abl2 abl2,LOC107657876,LOC107699422,LOC107599009,LOC107758002,LOC107707589,LOC107603207 other upstream 154014 10706719 ~ 10741425 (+)
tmem51a tmem51 other upstream 198608 10683078 ~ 10696831 (+)
zmynd12 zmynd12,rimkla,LOC106567384,LOC101062827 other upstream 331878 10543919 ~ 10563561 (+)
G130390 NA other upstream 537124 10357946 ~ 10358315 (+)
LOC113530800 LOC108266038 other downstream 720226 11622302 ~ 11633844 (+)
uck2a uck2,uck2a,LOC108441637,LOC107731246,LOC107668082,LOC107745792,LOC107585889,LOC106584056,LOC107549113,LOC107695269 other downstream 775435 11677511 ~ 11696791 (+)
porcn porcn,LOC108265120,LOC108441640,LOC107668076,LOC107585894,LOC107745789 other downstream 803471 11705547 ~ 11714032 (+)
foxp3a LOC108265789 other downstream 1077110 11979186 ~ 11995852 (+)
kcnq2a LOC108265949,LOC108442249,LOC107668096,LOC107550457,LOC107711924,LOC107731192,LOC107679259 other downstream 1294517 12196593 ~ 12230001 (+)

Expression


Co-expression Network