itih6 (itih6)


Basic Information

Item Value
gene id itih6
gene name itih6
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047610.1
NCBI id CM018556.1
chromosome length 25111544
location 19295519 ~ 19309834 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026920185.2
CCAGTATAATGAATTCAATCTCAAATGCCTTGGTAGTAGAAGGAAGATCTCAGTGCACGTGATTGCAATCAATGAACAAAAGCTGCACATATCAGCAGAGCTCTGTATggagagggacacacacacacacacacaaacaaggcgGGCATTCATGGGTTAACGGTGTGAGGATACTTGAGGCCTCCAAACGATGGCAGGATTGCGCGAAATTTCCAGCAGAGAGCTGCACTTGTACTTGTGCCAATAAACACCCCCTCTGTTCCTCTGTATGTAGCCTTCCCACAGGTACGAGACTGCGCGAGACTCTCTTGCGCACAGACCTGGATGACTTGTGGAAGCACGGGGAGGGATTTTACGCCTCGACAGCAAGAAAACGCACAGCTTTTTGTCACACAATGCTTCATGTGTGGGTTGCATGAAGCTGACGGAGGCTGAACAGAGACATTCGACTGCTTGAAAATGGTTGTGTATGTGCACAGGATCGCGGTGAGGCTGCTCATGACcgtggtgtgtgttggagcagcAGCGGAGTTCGGAACGCGTACAGACGCACGAGGCGCCGCTTTCACGAGATTAAGGCGTCAGAGCAACACAGCTAAACCTGCTCTGAAGATCACAGATTACCACGTGCGGTGCACCGTCATTTCCCGCTATGCTCTCACCACAGTAGAAAGTACAGTGTGGAACCAGCTCCATTTCACCAAAGAGGCAGCGTTTGAGGTTGATCTGCCTCCCTCAGCCTTCATCTCCAACTTTACCATCACATCTAATGGTAAAGTCCATGTGGCCGAAGTGAAGGAGAGAGCTGCTGCCAAGAAGATCTACGATGACGCCAAGAAGCAGGGGAAGACAACAGGACTTGTTGCCACCAAGGAGCGGGAGATTGAGAAGTTTCGGGTGGCTGTCAGCGTGCCTCCTGGAGTCCACATGCACTTTTCCCTGACGTATGAGGAGCTATTGACACGACGGCTGGGGCGCTATGAGCTGGCTTTGGGCCTCAGGCCTGGGCAGCCTGTGCAGAATCTCTCTGTGGATGTTAGTATAGCGGAGAGGAGTGAAATCAGCTTCATCAAAGTGTTACCACTCAGGACCAGTCGTCTGCTTACCAACACTGACCAAGCTGAGGCCAAAGCACCCCCCTCCACTCAGGTGCAGCAGAACCTACACTGTGCTCACATTCATTACAACCCCAGCCTGCAGCAGCAGAGGACCATCTCCCCCAAAGGCATCAATGCAGACTTTGTCCTCCAGTATGACGTAGAGCAAAGAGATCTCATGGGAGACATCCAGGTGCATGACGGTTTCTTTGTTCATTACTTTTCCCCGCGGGGCCTGCCGGTAGTTTCTAAAGATATCATCTTCGTTATTGACATCAGTGGCTCCATGATCGGCACGAAGATCAAACAGACTAAGGCAGCGATATCTACGATCCTGGGTGACCTACGTGAGGGCGACTACTTCAATCTCATTACGTTTTCGGATAAAGTGCAGATCTGGAAGAAAGACCGCACTGTGCTGGCCACAAAGCAGAACATACGGGATGCGAAGGAGTTTGTCAAGAAAATCGTTGCAGATGGCTGGACAAACATCAATGCGGCTCTTCTCTCAGCAGCACAGCTGATCaactcctcctcttcatctccTGCTAACCAATTGTCCACACCACGACGAGTTCCTATGATCGTCTTTCTGACCGATGGAGAGGCTACAATCGGAGTGACTGCACAAGAGGTTATTCTGCATAATGCTCAGAGTGCGCTGGGCTCAGTCTCTCTGTTTGCCCTGGCATTCGGAGATGATGCAGATTTTCCTCTACTGAAACGATTGGCTTTGGAGAACCGTGGGATAGCACGGATGGTATATGAGGATGCTGATGCTGCACTCCAATTAAAGGGTTTCTATGATGAGGTAGCGAGTCCACTACTGTCAGATATCCAGCTTTCCTACCTTGAAGACCAAGCTTATGATGTCACATGGTCCCTTTTCCCCAACTACTTCCAAGGCTCTGAGCTGGTAGTCACTGGGAAGATTAAGCCAGACATACAGGATCTGAAAGTTTCATTGACAGCAAGTGGCACAAAGCAGAAGGTGAAGGTAGAGAGTGAGTTTGTACTGGCCAAGCTTGAAGTAAATGAGACTTCAGCATCACTGGGGTGTGCCAGGGAACTGCATGGCATCTCCAACTTTATGCATCGCCTCTGGGCCTATTACACTATCAAGGAGCTTTTGTTGGCTAAACTCAACAGCTCAGATCCATTAGTACAACGCTTGCTAGCAGAGAAGGCCACCAACCTTTcactaaaatataattttgtcaCTCCAGTCACCTCTTTGGTGGTGGTTAAACCAGATATTGATGAGCCAAATCCAACTACTGTCTCTACAACCACGACTACACCCAAGCCTGTCACTACCACTACAGCAAGTGTGACCACCACACCTACACAAATGTCAAGTACCTCTAAAATGACTTCTGCTACCGAGGCATTGATCAAAAAGCCAAGCAAACCTTTAAAGCCCAGTAAACCTTCTCTCACCAAACCCCTTCGACCAGACCTGCCTATTCCTGGACATCCAATAAATACTCCTTCTCCAGACAAAAATGTAGCACCCAAGAGGACAACACCTTTACCACACAACTTATCTAAGACCACCTCTGCCCCTCTTTTGAGCAAAGCTCCCACTGTTCCCACCAGCACCATGAGAACTGATGCTCCCACTTTCCTCCCACTCAATTCCACTAGCACAGCTTCTCCACCTCTCAAGAGTTCAGTCGCAATGCCCAATGTGGCTGAAACCACAACACCACCCAGCTCAGAGAAACATCAAGTCCTGCCTCTCGAGAAACCCGCATTCTTATCTGACACTGACAGTTTTGCCACACCTGATGTTCCTGCAGTGCAGCCAGATTTTCAGGAAGTCCCTTCATCAAATGCTTCACCTGAAGATCCTGATGaggaaataaacatctccactcttctggctGCCTCCTTTGCCCCTATGCCAGGCATGACAGATGCACCCAATCTCTGGGAAGCTACTGGTATTTTAGATGTTTCTACAGCCATCCTGACAAAAGATGCTGATGATATCAAAGAGTATGATGTCTCGTATGAGTACGACACTGACTACATCATCCATTATGATTCCTccacACCAGACGACACAGATATCATAAGTTCTGTGGGAATCTTCTCCTCCTCAGtgGATGGAGACCCCCATTTTGTTGTTATGCTCCCAAAGATACATGAAAATCTGTGTTTTACTGTTGATGGCGAGGCCAATGATGTGTTACGTCTTCTGGAGGACCCAGTCACAGGCATTACAGTGAATGGCCATTTGATGTTGGCTCCTCCTAAGATTGGAATCGAGGACCGCACTCGCACCTTCTTTGACAAGATAACCATCAGAATTTCCAAAGGTGGAATCAAGATCACCGTTATGATAGACTCAGTGGTAGTGAAGGGAGAAGGGCTTGAAACTCTGTCTACCAGACAGGAGGGATCTGTGACACTCCCAGGCTTGAAGATTGTGCTCGATGGACACCAGAGCTGCTGGATTGAGCTCGGAAAAGGCGTCGTGTTCCTGGTTCTGATCCATCGATATAGTCACCCCACCTATTTCCAGATGGAGCATCTAGGATTCTACATAGCCGATGGCGAGGGGTTATCTTCTTTAACGCAAGGTCTACTCGGCCAGTTCCAGCACAGCACCATAGACGTGGTGAGGATAACAGACAGACATGGTGCCATGTTCCACCACGGTCAGACCAGCAACAACAGCACTCTGGCCTTGGGATTACTCATGAAAGGGGACGAACAAATTCCAGTCTCTTTACAGGATAAGGCTTTGAAGAACACACTAAATAAGCGCCACTCGGCCCAGTGCTGGGTGGTGCCCAAGGTGGAAGTGGAACGGCTCCTGGAGCGGCCTTACCAAAGCTATGTGGTGGATGACCTTTAAATGCCCTGTGGCTACATTTCAAGCTCATGTCTACTGATTCATAGCAGGGCCATAGAAGAATATAGGACACTACAGTGCGAGGGTGGCATATTTACCCTCAGTTAACATGTAAGCATAGAGGGTGTTCAGTATGGAAAAGTGACACTGTGGAAAGTTTTAATGTCTGTATAGAAAATACGACGAGTTGCTTAAAGACTGAAGAATCCAGGAGTTGAATCGGATTGCACTCAGGATGAAAAGCTACAGTCTGAACAATCATACCATTAAGAACTATATTTCAGGTACTGATTTTGTTTCaggaaatgataaaaatatatagattacATTTCAGAACAAGGATTTTTATGTAATGCTTATAGTTATTTTGTAGAAACATATATGTGTACA
>XM_026920186.2
ATGTGGCCGAAGTGAAGGAGAGAGCTGCTGCCAAGAAGATCTACGATGACGCCAAGAAGCAGGGGAAGACAACAGGACTTGTTGCCACCAAGTCAGTCCAAAAGTGTATTTGATACCTCCTCTGCTGGGATTACGCCATGTTTCTTTTGGCATTGACTGAGGAGCGGGAGATTGAGAAGTTTCGGGTGGCTGTCAGCGTGCCTCCTGGAGTCCACATGCACTTTTCCCTGACGTATGAGGAGCTATTGACACGACGGCTGGGGCGCTATGAGCTGGCTTTGGGCCTCAGGCCTGGGCAGCCTGTGCAGAATCTCTCTGTGGATGTTAGTATAGCGGAGAGGAGTGAAATCAGCTTCATCAAAGTGTTACCACTCAGGACCAGTCGTCTGCTTACCAACACTGACCAAGCTGAGGCCAAAGCACCCCCCTCCACTCAGGTGCAGCAGAACCTACACTGTGCTCACATTCATTACAACCCCAGCCTGCAGCAGCAGAGGACCATCTCCCCCAAAGGCATCAATGCAGACTTTGTCCTCCAGTATGACGTAGAGCAAAGAGATCTCATGGGAGACATCCAGGTGCATGACGGTTTCTTTGTTCATTACTTTTCCCCGCGGGGCCTGCCGGTAGTTTCTAAAGATATCATCTTCGTTATTGACATCAGTGGCTCCATGATCGGCACGAAGATCAAACAGACTAAGGCAGCGATATCTACGATCCTGGGTGACCTACGTGAGGGCGACTACTTCAATCTCATTACGTTTTCGGATAAAGTGCAGATCTGGAAGAAAGACCGCACTGTGCTGGCCACAAAGCAGAACATACGGGATGCGAAGGAGTTTGTCAAGAAAATCGTTGCAGATGGCTGGACAAACATCAATGCGGCTCTTCTCTCAGCAGCACAGCTGATCaactcctcctcttcatctccTGCTAACCAATTGTCCACACCACGACGAGTTCCTATGATCGTCTTTCTGACCGATGGAGAGGCTACAATCGGAGTGACTGCACAAGAGGTTATTCTGCATAATGCTCAGAGTGCGCTGGGCTCAGTCTCTCTGTTTGCCCTGGCATTCGGAGATGATGCAGATTTTCCTCTACTGAAACGATTGGCTTTGGAGAACCGTGGGATAGCACGGATGGTATATGAGGATGCTGATGCTGCACTCCAATTAAAGGGTTTCTATGATGAGGTAGCGAGTCCACTACTGTCAGATATCCAGCTTTCCTACCTTGAAGACCAAGCTTATGATGTCACATGGTCCCTTTTCCCCAACTACTTCCAAGGCTCTGAGCTGGTAGTCACTGGGAAGATTAAGCCAGACATACAGGATCTGAAAGTTTCATTGACAGCAAGTGGCACAAAGCAGAAGGTGAAGGTAGAGAGTGAGTTTGTACTGGCCAAGCTTGAAGTAAATGAGACTTCAGCATCACTGGGGTGTGCCAGGGAACTGCATGGCATCTCCAACTTTATGCATCGCCTCTGGGCCTATTACACTATCAAGGAGCTTTTGTTGGCTAAACTCAACAGCTCAGATCCATTAGTACAACGCTTGCTAGCAGAGAAGGCCACCAACCTTTcactaaaatataattttgtcaCTCCAGTCACCTCTTTGGTGGTGGTTAAACCAGATATTGATGAGCCAAATCCAACTACTGTCTCTACAACCACGACTACACCCAAGCCTGTCACTACCACTACAGCAAGTGTGACCACCACACCTACACAAATGTCAAGTACCTCTAAAATGACTTCTGCTACCGAGGCATTGATCAAAAAGCCAAGCAAACCTTTAAAGCCCAGTAAACCTTCTCTCACCAAACCCCTTCGACCAGACCTGCCTATTCCTGGACATCCAATAAATACTCCTTCTCCAGACAAAAATGTAGCACCCAAGAGGACAACACCTTTACCACACAACTTATCTAAGACCACCTCTGCCCCTCTTTTGAGCAAAGCTCCCACTGTTCCCACCAGCACCATGAGAACTGATGCTCCCACTTTCCTCCCACTCAATTCCACTAGCACAGCTTCTCCACCTCTCAAGAGTTCAGTCGCAATGCCCAATGTGGCTGAAACCACAACACCACCCAGCTCAGAGAAACATCAAGTCCTGCCTCTCGAGAAACCCGCATTCTTATCTGACACTGACAGTTTTGCCACACCTGATGTTCCTGCAGTGCAGCCAGATTTTCAGGAAGTCCCTTCATCAAATGCTTCACCTGAAGATCCTGATGaggaaataaacatctccactcttctggctGCCTCCTTTGCCCCTATGCCAGGCATGACAGATGCACCCAATCTCTGGGAAGCTACTGGTATTTTAGATGTTTCTACAGCCATCCTGACAAAAGATGCTGATGATATCAAAGAGTATGATGTCTCGTATGAGTACGACACTGACTACATCATCCATTATGATTCCTccacACCAGACGACACAGATATCATAAGTTCTGTGGGAATCTTCTCCTCCTCAGtgGATGGAGACCCCCATTTTGTTGTTATGCTCCCAAAGATACATGAAAATCTGTGTTTTACTGTTGATGGCGAGGCCAATGATGTGTTACGTCTTCTGGAGGACCCAGTCACAGGCATTACAGTGAATGGCCATTTGATGTTGGCTCCTCCTAAGATTGGAATCGAGGACCGCACTCGCACCTTCTTTGACAAGATAACCATCAGAATTTCCAAAGGTGGAATCAAGATCACCGTTATGATAGACTCAGTGGTAGTGAAGGGAGAAGGGCTTGAAACTCTGTCTACCAGACAGGAGGGATCTGTGACACTCCCAGGCTTGAAGATTGTGCTCGATGGACACCAGAGCTGCTGGATTGAGCTCGGAAAAGGCGTCGTGTTCCTGGTTCTGATCCATCGATATAGTCACCCCACCTATTTCCAGATGGAGCATCTAGGATTCTACATAGCCGATGGCGAGGGGTTATCTTCTTTAACGCAAGGTCTACTCGGCCAGTTCCAGCACAGCACCATAGACGTGGTGAGGATAACAGACAGACATGGTGCCATGTTCCACCACGGTCAGACCAGCAACAACAGCACTCTGGCCTTGGGATTACTCATGAAAGGGGACGAACAAATTCCAGTCTCTTTACAGGATAAGGCTTTGAAGAACACACTAAATAAGCGCCACTCGGCCCAGTGCTGGGTGGTGCCCAAGGTGGAAGTGGAACGGCTCCTGGAGCGGCCTTACCAAAGCTATGTGGTGGATGACCTTTAAATGCCCTGTGGCTACATTTCAAGCTCATGTCTACTGATTCATAGCAGGGCCATAGAAGAATATAGGACACTACAGTGCGAGGGTGGCATATTTACCCTCAGTTAACATGTAAGCATAGAGGGTGTTCAGTATGGAAAAGTGACACTGTGGAAAGTTTTAATGTCTGTATAGAAAATACGACGAGTTGCTTAAAGACTGAAGAATCCAGGAGTTGAATCGGATTGCACTCAGGATGAAAAGCTACAGTCTGAACAATCATACCATTAAGAACTATATTTCAGGTACTGATTTTGTTTCaggaaatgataaaaatatatagattacATTTCAGAACAAGGATTTTTATGTAATGCTTATAGTTATTTTGTAGAAACATATATGTG

Function

symbol description
itih6 Orthologous to human ITIH6 (inter-alpha-trypsin inhibitor heavy chain family member 6).

NR:

description
PREDICTED: inter-alpha-trypsin inhibitor heavy chain H6

GO: NA

KEGG:

id description
K24516 ITIH6; inter-alpha-trypsin inhibitor heavy chain H6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026920185.2 True 4350 mRNA 0.48 17 19295519 19309834
XM_026920186.2 False 3634 mRNA 0.47 14 19301726 19309830

Neighbor

gene id symbol gene type direction distance location
pfkfb1 pfkfb1,LOC108276267,LOC108425577,LOC107574688,LOC107673088 coding upstream 1318 19283497 ~ 19294201 (+)
si:dkey-78k11.9 NA coding upstream 19766 19273287 ~ 19275753 (+)
ccn5 wisp2 coding upstream 24297 19263417 ~ 19271222 (+)
ttpal ttpal,LOC107716173,LOC107695756,LOC107673079,LOC107564663,LOC107568409 coding upstream 100661 19190772 ~ 19194858 (+)
hnf4a hnf4a,LOC107673078,LOC107737506,LOC107568408 coding upstream 107560 19167301 ~ 19187959 (+)
atp6ap1b LOC108275744 coding downstream 12965 19322799 ~ 19331974 (+)
ptpn22 NA coding downstream 129602 19439436 ~ 19465336 (+)
zgc:158263 LOC108276042,LOC108441406 coding downstream 474737 19784571 ~ 19794997 (+)
zbtb48 zbtb48,LOC102780700 coding downstream 529877 19839711 ~ 19848662 (+)
syt6a syt6,syt6a,LOC108433426,LOC107673111,LOC107591076,LOC107593918 coding downstream 590180 19900014 ~ 19965413 (+)
G257242 NA non-coding upstream 43722 19251445 ~ 19251797 (+)
G257234 NA non-coding upstream 49812 19243185 ~ 19245707 (+)
G257232 NA non-coding upstream 53951 19241112 ~ 19241568 (+)
G257235 NA non-coding upstream 60258 19233003 ~ 19235261 (+)
G257199 NA non-coding upstream 176986 19117877 ~ 19118533 (+)
LOC113530341 NA non-coding downstream 36477 19346311 ~ 19350848 (+)
G257256 NA non-coding downstream 44893 19354727 ~ 19359740 (+)
G257255 NA non-coding downstream 47677 19357511 ~ 19361051 (+)
G257283 NA non-coding downstream 83703 19393537 ~ 19393903 (+)
G257287 NA non-coding downstream 93662 19403496 ~ 19405521 (+)
pkig NA other upstream 72960 19198426 ~ 19222559 (+)
fmnl3 LOC108276057,LOC108425567,LOC107716159 other upstream 361200 18879481 ~ 18934319 (+)
LOC113530386 slc26a9 other upstream 2107142 17175701 ~ 17188377 (+)
itga5 itga5,LOC107599342,LOC107723722 other upstream 2170568 17071136 ~ 17124951 (+)
G256046 NA other upstream 2787139 16508025 ~ 16508380 (+)
G257622 LOC108276210 other downstream 168468 19478302 ~ 19478895 (+)
si:ch73-206d17.1 LOC108275771 other downstream 315695 19625529 ~ 19705063 (+)
G258096 hoxc6,hoxc6a,LOC107593966,LOC108433405,LOC107664205,LOC107714999,LOC103034651 other downstream 1080975 20390809 ~ 20398714 (+)
LOC113530729 hnrnpa1,LOC108275985,LOC108275986,LOC107707002,LOC107714994 other downstream 1200410 20510244 ~ 20514195 (+)
ubxn10 ubxn10,LOC108275535,LOC108433381,LOC107385551,LOC107699345 other downstream 1593271 20903105 ~ 20907459 (+)

Expression


Co-expression Network