XLOC_005758 (fam120b)


Basic Information

Item Value
gene id XLOC_005758
gene name fam120b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 6086730 ~ 6125334 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00011390
GGTATTTCAGTTAGACATGCAGCTTTCAGCATGAGAGCATCTCACGCCAATTACCTGTAGTATTCTAGTCAGGTTATTCCTGCAACATCAAACTGTGTGTGACATTCAGATTGAGCTGACGATGGGTGTGAAGGGCTTACAGTATTTCATGGAGGTGTGTTGCCCAGATTCCTGTGTGCCAGTGGACCTCAAACAAATGGCGGGAAATCACCTCAAAGCCCATCCGGACAGCACTGCCTCTTTAGTAGTGGACGCCATGGCCTGTTTAAGATATTGGTATCGCTGTCCGGCCTGGGTCCACGGAGGCCAGTGGAAAGAATACATCAACATCCTTCAAGAATTCATCAACGCGTTCACAGCAGCAGGAATACGATTAATCTTCTTCTTCGATGGAACCGTCGAAGAGCGAAAGCGCTCAGAATGGATAAAGAGGCGTTTGAGAGTCAACCAAGACATCGCCAAAGTATTCCAGCACATTAAGACACACAATCAACAACCAAACAGCAGAAACCTCTTCTGTCTTCCCTCAGGACTTGCAACGTTCTCAAGATTTGCTTTAAAAAGTCTCGGTCAGGAGACTTTCTGCTCGGTTCGTGAAGGAGATTACGAGGTCGCGGATTATGCTCTGTCTCACAACTGCATGGGGATTCTCGGTCAGGATACAGATTTCGTCATCTATAACACTGTGCCGTATTTGTCCATCAGTAAACTGCATTTAAACAGCATGACCACTGTGCTGTTCTCCAGAGAAAAGCTGTGCCGGGTTTTGCAGCTTCACGTTCATGATCTCCCACTGTTATCTTGTCTTTTGGGTAATGACGTCGTTCATGAGCAGCAAATGCAGCGGCTTCGTAACATCGCTTTGGATTCGTATCGGATGAAATGTAAGGAGGTTCAAGGAGACAGGGTGTACGCTGCCGCAGAGTTTATTAACATTCATAAGCCCAGCTGTGAGGGAACGGTTGGTTTGTCTCAGCTTTCTTTGGTTAAGGCTGAGGAAGAAGCTCTGGAAAGAGGAATATGCATGTATTTGCTTCCAGGGCAAACGTCTCCATGGGTAAAGCGAAGTGTTTGGTCTTCTGAGCCCACGTGTGCAATGAGCGAGTTCGTGGCTGGTGATATTTTAGAGGCCGCAGTGGAGCAGCATAGGCGGGCTGAGAGTTTCTTCATCTATAATGTGTTGTATGACGGAGTCGTGGAGTGCAGTAACACACTGGAGGACGAGGACGAGATGGAGCTTCCACCACAGGCCATCTTATATCTGCCCATCCGGGAACGAATATACGGCATTTTACTGCCAACGGAGCCAGATGGTTCTGGCCACACTGTGTCTGTCAAGGAATGGTTCGTCTTTCCAGGAAATCCACTTAAAGAGCCCACCAGAGTCACTCCAAAACCCATCCGTCATCTGAAAGGGCCTCTTGATCTGAGGTCTGTGTGGTTCAAGACGGACCCTGAGGTGAAAACAATCAGAACATCAACACTCCTGGACATCTTTGACCTGTACGAGTTCACTGAAGAGCTGAAATACTTTGACAGCCCTTTGATTGCAGTGATTTGTCTTGTAACCTACATCGccattcagACGAGACAGCTTTCCCTGGAAGACGTAGATGCATATCTGAGCCAGGCTGTTTGTGTCAGATTCAAGTCCTTCAGAGAAACGCAACAGCTCAGGGGGGTCCAGTGGTCCTTCAGGCATCTGGCCGGAGCGACGCTCATTGTTCGCTGTTGAAATGCTTGCGGAGCAGCTGCTGTTCTGGTTTGTTGTCCTGCTCTATACCTTTACAGCAGCAGGGTGGCATCAGCATTGTCCTCAAAGCCTATTGACTTCCACACCGAGCAATTAGCGGCTTTAAAGGTGCTAAGACTTTTGACGTGTCCTTTTAAGCGCTTTAATCAAAGCCAGTCTACTTCATTCTGCTTTGTAAACCTTATGCATAACAGTGAATGTGATTTAAAGTTCCCCGTGAAATTAAAATAGAgcttttttagatgttagtgtcAGTAAGTTAGTCTTAAAGGGCTCCAATTTTGGCCTTTTTTAACAA
>TCONS_00011391
GCCAACGGAGCCAGATGGTTCTGGCCACACTGTGTCTGTCAAGGAATGGTTCGTCTTTCCAGGAAATCCACTTAAAGAGCCCACCAGAGTCACTCCAAAACCCATCCGTCATCTGAAAGGGCCTCTTGATCTGAGGTCTGTGTGGTTCAAGACGGACCCTGAGGTGAAAACAATCAGAACATCAACACTCCTGGACATCTTTGACCTGTACGAGTTCACTGAAGAGCTGAAATACTTTGACAGCCCTTTGATTGCAGTGATTTGTCTTGTAACCTACATCGccattcagACGAGACAGCTTTCCCTGGAAGACGTAGATGCATATCTGAGCCAGGCTGTTTGTGTCAGATTCAAGTCCTTCAGAGAAACGCAACAGCTCAGGATTCCTGTTGTAGACCCCAGGGCCGTCCAGCTCGGCTCGGTCTTTGTGCGCGGTCTGACCTACCTCATCGCAGCCAACAGCGCTTGTGGTTTCCCGTTCCCAATGGATGAGCTCATGCCATGGAAGTGCTTCGACGGCCTGCTCTTCCACTCCAAGTATCTGCAAGCCCACTCAGGCGCTTCAACGGAAGAGCTCCTCGAAGGCAATTCCTCCTGGACGTCTTTGTTCCAGTCTGTCAAAGAGCTGGTGCTGGAAGTCTGCAGAAAGCACAACAGTCCCGTCCACAGCCGACCGCGCAGACGACAATACAGAGACGTGCGGCCTGTGGAGGTTGATGATGAGCCTGGAGAAAGACGACCCCAGATCCATCATCCCACACGCCAGGACTTCAGAGCTCCAGCACACCACCAGCAAGATTATAGGCCAAGAGCAAGACATCCAAAGAGAGGAAGGTATCACCTCGCACCCAGATGGACCTATTCTCAGAACTAAACCAGACTGACGGATGATAAAATGAGTGAATAGCCTCTGGTGGAAACTGTTGCCCTCTACAGAATTAAGCAGCGATGAACTGCATTCAGATGGGAATGTTCATGTTCTCGCTTGGCCTAATTCAGTTCCCACCCTTTTGTTTTGACTGCAGATAATTATTGACAGACGCCAAAGCTCATGGACGTCTGCATGAATGTGCAGTTTTCATACACAGACAGAGATAACCCTCCCATTCTGTGTTCAGTGATATCCTGAAAAGCCCTCAGAATTATATCCTATAGTGAG

Function

symbol description
fam120b Predicted to be active in nucleus. Orthologous to human FAM120B (family with sequence similarity 120B).

GO:

id name namespace
GO:0005634 nucleus cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040801-119 Predicted to be active in nucleus. Orthologous to human FAM120B (family with sequence similarity 120B).

Ensembl:

ensembl_id ENSDARG00000030804

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00011390 False 2051 mRNA 0.47 7 6086730 6110023
TCONS_00011391 True 1159 mRNA 0.50 9 6092135 6125334

Neighbor

gene id symbol gene type direction distance location
XLOC_005757 phf10 coding upstream 84747 5978809 ~ 6001983 (+)
XLOC_005756 NA coding upstream 512617 5568968 ~ 5574113 (+)
XLOC_005755 NA coding upstream 528209 5489258 ~ 5558521 (+)
XLOC_005754 NA coding upstream 622849 5453112 ~ 5463881 (+)
XLOC_005753 NA coding upstream 675273 5406150 ~ 5411457 (+)
XLOC_005759 FP089536.1 coding downstream 16790 6142124 ~ 6144821 (+)
XLOC_005760 ppm1g coding downstream 63425 6188759 ~ 6205567 (+)
XLOC_005761 apmap coding downstream 94217 6219551 ~ 6239216 (+)
XLOC_005762 angpt2a coding downstream 169839 6295173 ~ 6306886 (+)
XLOC_005763 csmd1a coding downstream 217076 6342410 ~ 6582725 (+)
XLOC_005752 CR788226.1 non-coding upstream 685510 5397541 ~ 5401220 (+)
XLOC_005764 CU929430.1 non-coding downstream 288950 6414284 ~ 6414400 (+)
XLOC_005765 NA non-coding downstream 713267 6838601 ~ 6882524 (+)
XLOC_005770 NA non-coding downstream 1149137 7274471 ~ 7317333 (+)
XLOC_005771 CU179758.1 non-coding downstream 1196911 7322245 ~ 7340412 (+)

Expression


Co-expression Network