XLOC_005784 (CT030029.1)


Basic Information

Item Value
gene id XLOC_005784
gene name CT030029.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 8539267 ~ 8539381 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00011428
GCCGGcagttagctctctgcaactcttacattTTCAccaactgaagctaagcagggctgcgcctgatCAGTACATGGATGGAAGATCACATGGAAAAGagaggttgctgccggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000116824

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00011428 True 115 rRNA 0.50 1 8539267 8539381

Neighbor

gene id symbol gene type direction distance location
XLOC_005783 galm coding upstream 221051 8306399 ~ 8318216 (+)
XLOC_005782 hells coding upstream 268549 8255106 ~ 8270718 (+)
XLOC_005781 CABZ01065679.1 coding upstream 383662 8131622 ~ 8155605 (+)
XLOC_005780 CABZ01065684.1 coding upstream 515802 8011303 ~ 8023465 (+)
XLOC_005779 gbf1 coding upstream 790045 7575563 ~ 7749222 (+)
XLOC_005785 socs5b coding downstream 65329 8604710 ~ 8628038 (+)
XLOC_005786 NA coding downstream 109885 8649266 ~ 8656457 (+)
XLOC_005787 prop1 coding downstream 137785 8677166 ~ 8683552 (+)
XLOC_005788 ttc7a coding downstream 154029 8693410 ~ 8756048 (+)
XLOC_005789 epcam coding downstream 301391 8840772 ~ 8843363 (+)
XLOC_005777 NA non-coding upstream 1066272 7469877 ~ 7472995 (+)
XLOC_005774 CT027980.2 non-coding upstream 1157634 7381518 ~ 7381633 (+)
XLOC_005773 NA non-coding upstream 1168631 7369160 ~ 7370636 (+)
XLOC_005807 BX511084.1 non-coding downstream 911445 9450826 ~ 9464509 (+)
XLOC_005817 BX248127.1 non-coding downstream 1334513 9873894 ~ 9874010 (+)
XLOC_005820 NA non-coding downstream 1611694 10151075 ~ 10302070 (+)
XLOC_005822 NA non-coding downstream 1722817 10262198 ~ 10266971 (+)

Expression


Co-expression Network