XLOC_005774 (CT027980.2)


Basic Information

Item Value
gene id XLOC_005774
gene name CT027980.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 7381518 ~ 7381633 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00011412
ttgccagcagctagctctctgcaactctcacatggtcggtTGCTGAAGCTGAGTAGGGCTGCTCCCGGTTAGTTGCTGCGTGGGAGACCACTTAGGAATACtgggttgctgccaga

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000107688

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00011412 True 116 rRNA 0.56 1 7381518 7381633

Neighbor

gene id symbol gene type direction distance location
XLOC_005773 NA coding upstream 10882 7369160 ~ 7370636 (+)
XLOC_005772 CT027980.1 coding upstream 33773 7346601 ~ 7347745 (+)
XLOC_005771 CU179758.1 coding upstream 41106 7322245 ~ 7340412 (+)
XLOC_005770 NA coding upstream 64185 7274471 ~ 7317333 (+)
XLOC_005769 aifm2 coding upstream 119839 7241170 ~ 7261679 (+)
XLOC_005775 exoc3l4 coding downstream 6189 7387822 ~ 7414096 (+)
XLOC_005776 tnfaip2b coding downstream 60390 7442023 ~ 7453702 (+)
XLOC_005777 NA coding downstream 88244 7469877 ~ 7472995 (+)
XLOC_005778 cngk coding downstream 95867 7477500 ~ 7524090 (+)
XLOC_005779 gbf1 coding downstream 193930 7575563 ~ 7749222 (+)
XLOC_005765 NA non-coding upstream 498994 6838601 ~ 6882524 (+)
XLOC_005780 CABZ01065684.1 non-coding downstream 629670 8011303 ~ 8023465 (+)
XLOC_005781 CABZ01065679.1 non-coding downstream 749989 8131622 ~ 8155605 (+)
XLOC_005784 CT030029.1 non-coding downstream 1157634 8539267 ~ 8539381 (+)
XLOC_005786 NA non-coding downstream 1267633 8649266 ~ 8656457 (+)

Expression


Co-expression Network