XLOC_005795 (pimr152)


Basic Information

Item Value
gene id XLOC_005795
gene name pimr152
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 9046473 ~ 9049659 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00011448
TAAAAAGCTTTTGACGTAGCAGAAACTCTCATTAGCTTCTTTGGATGtctagtagttcagtactttctgcgATTCAACAGTACAGTGATAAAATGGCATTTTCAAAACTGATTAACCGTCTGAAGAAAGCGTTTGATCAGCTATGTGTGCAGGAGATCCACGAACTTCACGCAGAGCCCATCAGTAGCTCTAAATTCTTCTGCACTGCTGTGAGCAACCTGGAGCTGGAAGTTCTCCAACCTCCAGCTCTTGATGCTCCAGCAGACGAAGATTTGGACTCTAAACCGGAAGTGAACAGCTTTGACTCTGCAGTGGTCATTGAGAACGACTCTGCAGAGCTTCACTTCCCAGCAGACAACAAATCCTCCCTCAGTGAGGACAGTCTGGAGCAAGAGCTTGATAGTCCTCCAAGTTCACCATCTGATGAGGACAATGAACTTCCAGTGAGCCAGCAGCTCATAACAGATGACATCTGTGACTCTGCCCTGGATGAAAACTCGAACCCTTTACCGGATCAGGTCTCACAAGAGGACTTTGCTGTGGAGTCTACAGCAGATGatgggacctgcttggacaataATGACATCAGCTGCCGCTACAAACTCGGAAAGCAGCTTGGTGAAGGAGGTTTCGGCTCCGTGTATGAGGGGATTCGCATACAGGATGGTCTGCAGGTGGCAGTTAAATTTGTCCAGAAGACCCCAAATATGCAAGATGTCAGCTCTtcatgtgaccaGCCACTTCCTCTAGAGATCACCTTGGCAAACATGGCCAGCGGTGGCTCCAGGTGTCCGAATATTATTAAGCTCCTGGACTGGCAGGTCTTTGAAAACCATTATGTCATGGTGATGGAGCGGCCTAGTCCAAGCATGGACCTGGAGGCATTCCTTGAAGTCAGCGGAGGAGTCCTCAGTGAGAAAACAGCACATACCATCATGAGGCAAGCTGTTTATGCGGCCAATGTGTGCTGTTACCGCGGGGTGTTCCACCGGGACATTAAGCTTCAAAACCTGCTGGTGAACCCCGACACACTGGAAGTCAAGCTGATCGACTTCGGGTGTGGAGACTTCATGATGGAATCAGCCTACAGTCTCTTCTCTGGCACAGAAGCGTACATCCCGCCAGAGTTTTATGAAAAAGGATGCTACCGGGCCAAACCAGCGACGGTCTATTCTCTTGGGGTTCTTCTGTTCACAATGCTCCATGGAGAATTCCCATCAGCGTATGACCTGTACTACCTCCAACATGACTGgtccaaatttaccctctctcaagAATGCTGTGATATGATGAGGGCTTGTCTGCATGAGAATCCAGAGTGCAGAATTCCTCTAGAAGAGATGCCTTACCACGACTGGTCCATGCTGGAGTTCTGAGTCACATTAGCagaatgttttgtatatttgatttttgtacatgtctgtaataaagatatattttattgAA

Function

symbol description
pimr152 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

GO:

id name namespace
GO:0043066 negative regulation of apoptotic process biological_process
GO:0006468 protein phosphorylation biological_process
GO:0007346 regulation of mitotic cell cycle biological_process
GO:0016310 phosphorylation biological_process
GO:0046777 protein autophosphorylation biological_process
GO:0005737 cytoplasm cellular_component
GO:0016740 transferase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function
GO:0016301 kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-081028-8 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

Ensembl:

ensembl_id ENSDARG00000112789

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00011448 True 1446 mRNA 0.48 7 9046473 9049659

Neighbor

gene id symbol gene type direction distance location
XLOC_005794 si:dkey-112g5.3 coding upstream 26414 9016867 ~ 9020059 (+)
XLOC_005793 pimr154 coding upstream 44033 8999261 ~ 9002440 (+)
XLOC_005792 hcar1-3 coding upstream 52403 8987957 ~ 8994070 (+)
XLOC_005791 haao coding upstream 63691 8954667 ~ 8982782 (+)
XLOC_005790 thada coding upstream 92526 8892784 ~ 8953947 (+)
XLOC_005796 pimr151 coding downstream 21705 9071364 ~ 9074548 (+)
XLOC_005797 pimr155 coding downstream 42299 9091958 ~ 9140301 (+)
XLOC_005798 pimr152 coding downstream 112806 9162465 ~ 9165545 (+)
XLOC_005799 pimr156 coding downstream 135142 9184801 ~ 9187991 (+)
XLOC_005800 pimr158 coding downstream 164146 9213805 ~ 9216989 (+)
XLOC_005786 NA non-coding upstream 390016 8649266 ~ 8656457 (+)
XLOC_005784 CT030029.1 non-coding upstream 507092 8539267 ~ 8539381 (+)
XLOC_005781 CABZ01065679.1 non-coding upstream 890868 8131622 ~ 8155605 (+)
XLOC_005780 CABZ01065684.1 non-coding upstream 1023008 8011303 ~ 8023465 (+)
XLOC_005777 NA non-coding upstream 1573478 7469877 ~ 7472995 (+)
XLOC_005807 BX511084.1 non-coding downstream 401167 9450826 ~ 9464509 (+)
XLOC_005817 BX248127.1 non-coding downstream 824235 9873894 ~ 9874010 (+)
XLOC_005820 NA non-coding downstream 1101416 10151075 ~ 10302070 (+)
XLOC_005822 NA non-coding downstream 1212539 10262198 ~ 10266971 (+)
XLOC_005823 AL929457.2 non-coding downstream 1360103 10409762 ~ 10457446 (+)

Expression


Co-expression Network