AMCG00000224


Basic Information

Item Value
gene id AMCG00000224
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 7760630 ~ 7768260 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000224
ATGGCAGCTTGGTTCATCTTTGCCATCGCACTGAGTATTTCACTTTCCACGCAGGTCTCGGGATCCGCTGTATTCGAGCTCGACCTGCAGCAGTTTGTCAATACACAGGGTTTGCTAGCTAATGGGCATTCGTGCAAACCGGACTGCAGGACCTTCTTTAAGGTCTGTCTGAAGAACTACCAGGCGGTGGTGACTGCAGGTGAATGCTACTTTGGCACTGTGACCACACCGGTCCTGGGTGCCAACAGCTTCACCATCCTGGAGGCAGGCAGCTTTAGCAAACCCATTCGCATGGAGATAGTTGGATATCCGGGATCCTTTTCTCTCATAATTGAAGCCTGGTATCAACCTGTAGACAAATTCAACCCAGATTTAATGATTAGCTTTTTTGCCATCAAAACAAAGTTGGAAGTAGGAGATGAGTGGTCTCAGGATGTGCAGGCCGACAAGGAGACGACGCTAAGGTACTCTTACCGGGTCATCTGCAAAGAAAATTACTACGGCGAAAGGTGTTCCAAAAAATGCTCGCCCAGGGATGACCATTTTGGCCACTACACCTGCACCCCTGAAGGGGAAAAATCCTGTTTCCCTGGCTGGAAGGGAGAATACTGCGAAGAACCGATCTGTCGTGAGGGATGTAGCATGACAAATGGAAACTGTACGATGCCAGGGGAGTGTGTGTGCAGGAAAGGTTGGCAGGGTGAATTCTGTGATGAATGCGAGAGACATCCTGGCTGTTTACACGGTACCTGTCAGATGCCCTGGCAGTGCAACTGTAAAGAGGGCTGGGGCGGATTGTTCTGTGAGCAGGATCTAAACTACTGCACTCATCATAAACCCTGCCAGAACGGGGCCACATGTATGAACACTGGACAAGGAAGCTACACGTGTACGTGCAGACCTGGTTTCACTGGTGTAGACTGTAATATGGAGGTTCGGGAGTGTGATAGCAACCCCTGCAAACACGGAGGAAAGTGCATGGATCTTGAAAATGGCTACCGATGCACCTGTCCTCAAGGTTTTGAGGGGACCCACTGTGAACACAGCTCTGTGACCTGTGCAGACTCACCCTGTTTTTACAATGGCATCTGCAGGGAGGAGAAAAACAATGGAAGGAGCTATGTTTGTCAATGTCCTCAAGGTTTTACTGGACTCAACTGCGAAAAGAAAGTCGACAAATGCACTACCCTTCCGTGCGCAAATGGTGGACTGTGTGTCATCCACAGCAAGATGAGGGTGTGCAGCTGTCGCTCAGGATTCACAGGCCAGCGTTGTGAGATTAATATCAACGAGTGTGCCACTAACCCTTGTGGCAACGGAGGCACCTGCATCGATAGGATAAACGACtacaactgtgtgtgtgcacctgGCTACACCGGGAGAAACTGCAACCAGGTGATGGACGAATGCATGTCCCAGCCTTGCAGCAACGGAGGAAGCTGTCACTCTGGAGATAACGGCAAATCGTTTAGTTGCATGTGTCCGGCTGGTTTCACAGGCCCCCACTGTGCATTGGTCGTCCGGCCAGTGCCCAACCGAGAGTTAAAGGATTCCTTTCCCTGGGTTGCCATCTCCATGGGAGTGGGACTTGTCGCTCTGCTCATGTTGCTTTGCATGGTTGTCATCGTTCTGAGGCACATCCAGAGGCAAAGGAGTCAGGACGAACAGGACTCTGAGACCATGAACAACCTGTCAGACTTCCAGAAAGACAACCTCATCCCAGCGTCCCAGCTTAAAAACACTAACAAGAAAGTGGACTTAGAGGTGGACTGCGCTGTCGAAAAGTCAAaccacaaacataaaaactacCATTTGGACTACAACTCGGCGAAAGACTTCAAAGATGACATGTCTCAAGAGGATAAATGTCACAATCATGAAAAATGtctagaagaaaaaataccacTTAGAATTTACAGTGAAAAGCCGGAGTGTAGGATATCAACGATATGCTCCCCAAGGGATTCAATGTAccagtctgtgtttgtaatagcGGAGGAGAGGAATGAGTGTGTCATAGCAACTGaggtATAA

Function

GO: NA

KEGG:

id description
K06051 DLL; delta

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000224 True 2034 mRNA 0.49 11 7760630 7768260

Neighbor

gene id symbol gene type direction distance location
AMCG00000225 NA coding downstream 7064 7746823 ~ 7753566 (-)
AMCG00000223 NA coding downstream 13962 7744581 ~ 7746668 (-)
AMCG00000222 NA coding downstream 70674 7685941 ~ 7689956 (-)
AMCG00000237 zfyve1,LOC107721321 coding downstream 97635 7653443 ~ 7662995 (-)
AMCG00000236 NA coding downstream 141433 7594259 ~ 7619197 (-)
AMCG00000226 NA coding upstream 73155 7841415 ~ 7847344 (-)
AMCG00000239 NA coding upstream 118230 7886490 ~ 7892150 (-)
AMCG00000240 NA coding upstream 130057 7898317 ~ 7914432 (-)
AMCG00000253 stxbp6 coding upstream 900641 8668901 ~ 8687083 (-)
AMCG00000254 NA coding upstream 961025 8729285 ~ 8734548 (-)
G148962 NA non-coding downstream 1667 7758682 ~ 7758963 (-)
G148801 NA non-coding downstream 619662 7140362 ~ 7140968 (-)
G148610 NA non-coding downstream 1612344 6147929 ~ 6148286 (-)
G148486 NA non-coding downstream 2048754 5711019 ~ 5711876 (-)
G148417 NA non-coding downstream 2305141 5455246 ~ 5455489 (-)
G149002 NA non-coding upstream 187712 7955972 ~ 7956264 (-)
G149030 NA non-coding upstream 535559 8303819 ~ 8304215 (-)
G149068 NA non-coding upstream 760807 8529067 ~ 8583456 (-)
G149075 NA non-coding upstream 804822 8573082 ~ 8575086 (-)
G149077 stxbp6 non-coding upstream 900756 8669016 ~ 8739984 (-)
G148851 gpx2 other downstream 397938 7361222 ~ 7362692 (-)
G148692 LOC107756589,LOC107552947,LOC107682372,LOC100534413,LOC105015666 other downstream 1197325 6556705 ~ 6563305 (-)
AMCG00000190 cyp1c1,cyp1c3,cyp1c2,LOC107745367,LOC106610849 other downstream 1544189 6214005 ~ 6216441 (-)
AMCG00000189 NA other downstream 1550673 6207514 ~ 6209957 (-)
AMCG00000168 gchfr,LOC106583112 other downstream 1606329 6150720 ~ 6154301 (-)
G149011 NA other upstream 327705 8095965 ~ 8106839 (-)
AMCG00000260 gpr137c,LOC107583456,LOC107693135,LOC107723581,LOC107564956,LOC107751764,LOC106610616 other upstream 1258080 9026340 ~ 9045855 (-)
AMCG00000270 gbg2,gng2,LOC108239039,LOC106603227,LOC107569409 other upstream 1401823 9170083 ~ 9188266 (-)
G149321 NA other upstream 1719619 9487879 ~ 9488609 (-)
G149341 sos2 other upstream 1772351 9540611 ~ 9541259 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location