G149030


Basic Information

Item Value
gene id G149030
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 8303819 ~ 8304215 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU187523
GAGCATGTAAGACGATTAACCAAGGCTCTCTTCTGCTGTCGGAGGGCACGTGGTTTTGGTTTGTGGCTGTAAAATCAGATATCACTTTTCCTTGTAAAAATCTCAAACCCCCAGCTTAAGAAATTGTGtcaacaaaaaaggaaaggatcTTGCTTCAAATAAAACCCAGCTGTCTTGAGCTTCATTACTGGTATGATTCTTGTagggtgtttttctttttcggACAACATCTTTGAGGGACTCGGTCGGAGAAAACATCCTTTCATTTACACAGGATTCCAAACGCAGACCATCAAACAGGGTTTTGAACGAGCACTAAAAAGAACTGCCGCAAAGTGACGCTGGAGAAGGAGAGACCCAGGAGTGGCACATCTGGATTATCATTCCTGGACAGCAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU187523 True 397 lncRNA 0.44 1 8303819 8304215

Neighbor

gene id symbol gene type direction distance location
AMCG00000240 NA coding downstream 389387 7898317 ~ 7914432 (-)
AMCG00000239 NA coding downstream 411669 7886490 ~ 7892150 (-)
AMCG00000226 NA coding downstream 456475 7841415 ~ 7847344 (-)
AMCG00000224 NA coding downstream 535559 7760630 ~ 7768260 (-)
AMCG00000225 NA coding downstream 550253 7746823 ~ 7753566 (-)
AMCG00000253 stxbp6 coding upstream 364686 8668901 ~ 8687083 (-)
AMCG00000254 NA coding upstream 425070 8729285 ~ 8734548 (-)
AMCG00000242 fermt2 coding upstream 447462 8751677 ~ 8771216 (-)
AMCG00000243 NA coding upstream 483890 8788105 ~ 8814916 (-)
AMCG00000241 bmp4 coding upstream 549004 8853219 ~ 8863951 (-)
G149002 NA non-coding downstream 347555 7955972 ~ 7956264 (-)
G148962 NA non-coding downstream 544856 7758682 ~ 7758963 (-)
G148801 NA non-coding downstream 1162851 7140362 ~ 7140968 (-)
G148610 NA non-coding downstream 2155533 6147929 ~ 6148286 (-)
G148486 NA non-coding downstream 2591943 5711019 ~ 5711876 (-)
G149068 NA non-coding upstream 224852 8529067 ~ 8583456 (-)
G149075 NA non-coding upstream 268867 8573082 ~ 8575086 (-)
G149077 stxbp6 non-coding upstream 364801 8669016 ~ 8739984 (-)
G149087 NA non-coding upstream 439656 8743871 ~ 8744499 (-)
G149125 NA non-coding upstream 547101 8851316 ~ 8851779 (-)
G149011 NA other downstream 196980 8095965 ~ 8106839 (-)
G148851 gpx2 other downstream 941127 7361222 ~ 7362692 (-)
G148692 LOC107756589,LOC107552947,LOC107682372,LOC100534413,LOC105015666 other downstream 1740514 6556705 ~ 6563305 (-)
AMCG00000190 cyp1c1,cyp1c3,cyp1c2,LOC107745367,LOC106610849 other downstream 2087378 6214005 ~ 6216441 (-)
AMCG00000189 NA other downstream 2093862 6207514 ~ 6209957 (-)
AMCG00000260 gpr137c,LOC107583456,LOC107693135,LOC107723581,LOC107564956,LOC107751764,LOC106610616 other upstream 722125 9026340 ~ 9045855 (-)
AMCG00000270 gbg2,gng2,LOC108239039,LOC106603227,LOC107569409 other upstream 865868 9170083 ~ 9188266 (-)
G149321 NA other upstream 1183664 9487879 ~ 9488609 (-)
G149341 sos2 other upstream 1236396 9540611 ~ 9541259 (-)
G149395 NA other upstream 1452166 9756381 ~ 9766794 (-)

Expression


Co-expression Network