G149075


Basic Information

Item Value
gene id G149075
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 8573082 ~ 8575086 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU187573
TTTCTTATCAgagaaaaactgtttatttaattttagtcaCAATGGTGCATCTGTGGTGATCACCACCCACGCTCTATTATACAGGTTAACACAAGATTAAACATCATGCAAAGTAAACTATCACACATACACctgtgtgttactgtttttaacatttaatgtcagccatgtatatataaaaaaagattaataatggGTGGTGGAAATAACTTGGTTCCAAGGAGCACGACTGCGCTCGCACCTGGTATAAAAAAGGACAGGAAGCATGTTGAAGTGTGTGTCTCGTCAGCTCAGAGTCTCTTCCGTGTAATCGTAAGTTTGGTGAAAAGACATTCTTGATGGAAGTGGTTGTGGCTCTCGCTGGCAGTGGCTTGAAGGTCCTTTAGCACAGAGACTTCCCCGACTTCACGTTCTGGGCACAGGTCCGGGCCAGGTTCACTCCTTGGAGGAAGAGGTCAGTGAACTGATCCAGTCCAACACAGGTCGTTAACGGAGAAACAAATCCATACAAGCCCCCGAGGAAAATGCTGATAGGCCAGGCGAGGAAAATCAATATAAGGAGCCAGAATATGGACCACAAGATACACCCACAATCAGCCATGTTTGAGCCCGTAGCCGACTTCAACTTCGAAGCAGTTTCTTTAGGCTGGACTGGCTGCTGGGTCACCGTCGAGCTAAATATTTCCTGCTCTGGGTTGCTAAGCGAGTTTGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU187573 True 713 lncRNA 0.45 2 8573082 8575086

Neighbor

gene id symbol gene type direction distance location
AMCG00000240 NA coding downstream 658650 7898317 ~ 7914432 (-)
AMCG00000239 NA coding downstream 680932 7886490 ~ 7892150 (-)
AMCG00000226 NA coding downstream 725738 7841415 ~ 7847344 (-)
AMCG00000224 NA coding downstream 804822 7760630 ~ 7768260 (-)
AMCG00000225 NA coding downstream 819516 7746823 ~ 7753566 (-)
AMCG00000253 stxbp6 coding upstream 93815 8668901 ~ 8687083 (-)
AMCG00000254 NA coding upstream 154199 8729285 ~ 8734548 (-)
AMCG00000242 fermt2 coding upstream 176591 8751677 ~ 8771216 (-)
AMCG00000243 NA coding upstream 213019 8788105 ~ 8814916 (-)
AMCG00000241 bmp4 coding upstream 278133 8853219 ~ 8863951 (-)
G149030 NA non-coding downstream 268867 8303819 ~ 8304215 (-)
G149002 NA non-coding downstream 616818 7955972 ~ 7956264 (-)
G148962 NA non-coding downstream 814119 7758682 ~ 7758963 (-)
G148801 NA non-coding downstream 1432114 7140362 ~ 7140968 (-)
G148610 NA non-coding downstream 2424796 6147929 ~ 6148286 (-)
G149077 stxbp6 non-coding upstream 93930 8669016 ~ 8739984 (-)
G149087 NA non-coding upstream 168785 8743871 ~ 8744499 (-)
G149125 NA non-coding upstream 276230 8851316 ~ 8851779 (-)
G149132 NA non-coding upstream 307562 8882648 ~ 8945588 (-)
G149268 pygl,LOC104938237 non-coding upstream 786246 9361332 ~ 9363435 (-)
G149011 NA other downstream 466243 8095965 ~ 8106839 (-)
G148851 gpx2 other downstream 1210390 7361222 ~ 7362692 (-)
G148692 LOC107756589,LOC107552947,LOC107682372,LOC100534413,LOC105015666 other downstream 2009777 6556705 ~ 6563305 (-)
AMCG00000190 cyp1c1,cyp1c3,cyp1c2,LOC107745367,LOC106610849 other downstream 2356641 6214005 ~ 6216441 (-)
AMCG00000189 NA other downstream 2363125 6207514 ~ 6209957 (-)
AMCG00000260 gpr137c,LOC107583456,LOC107693135,LOC107723581,LOC107564956,LOC107751764,LOC106610616 other upstream 451254 9026340 ~ 9045855 (-)
AMCG00000270 gbg2,gng2,LOC108239039,LOC106603227,LOC107569409 other upstream 594997 9170083 ~ 9188266 (-)
G149321 NA other upstream 912793 9487879 ~ 9488609 (-)
G149341 sos2 other upstream 965525 9540611 ~ 9541259 (-)
G149395 NA other upstream 1181295 9756381 ~ 9766794 (-)

Expression


Co-expression Network