AMCG00000285 (map4k5)


Basic Information

Item Value
gene id AMCG00000285
gene name map4k5
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 9440061 ~ 9486689 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000285
GTTTACAGCGGCCTCTCTTTATTTAGGGCGCTGGCCGGCAGGGGGCGCTGCGGGCGTTCAGAGGCGGCCGAGCGAATCGCAGCGGGGCTCGGGAGATGACGTCACTTCCAGTGGCATGCAGCCCGTATGAATCGCACGGTGGATGAAGACGCGCAAGTGGAAAAAGTTATTTCTCTCAGATGTGTGCGGCCGCCGGCGCAATTAGCGCGTCTCTCGCCGTATGTGCGCCATTTTATTGAATCGGAGAGAAAGTGGACGCTACCCCCCCCTCCAGAAGTTGCACACCGGCGTCTAACCAGCTTATGCGCGAAAGGTGCCATTTTCCGTGCCGTCCGCCCTGCTGAATGGGACCCGAGTGGGATGCCCAAGCGGCCCGGCggtgtccgtgtccgtgtctGCGCTAACGGGGCCCCGGTGTGACGGAGGTGTCGTCGTCGGGAGGAAGTGACATTGATGACAGCGTCGGCGGCGAGGCGGAGTGCGGGCTGAGCCGAGCAGATGAGCGCCGTGTTGTTGATGGAGGTGGGTGACCGGGAGAGCCTTTTTGGATGATTAAAGCCTTTGGACTCGACGTCTGCTGAGCGCAAGAGACTGCGGAAAGTGCGCAGATGGAGGTCCTGAGCGCCGATTGCGCCAGATGAAGcagGAAATGGATAATAAGCCATAGTtggaaatataacattttctccTGTAAGAAAACGAGAAACTAGACAACAACAACGAAAACCTTCCGCAATCTGGATATCGTTTTAAATCCCATCCAAGCCACATTGCTATTGCATGTGAAAGACCCAAAGAAAGGAGCATGGATGCCCTTTCCCGGCCCAGCGGGGAGATCCAGAGGAGGAACCCCCAGCAGGACTTCGAGCTGGTCCAGAGAGTGGGCAGCGGCACCTATGGGGACGTCTATAAGGCCCGCAACATCCAGACAGGAGAGCTGGCAGCCGTCAAGATTATCAAACTAGAACCAgGTGATGACTTTTCCATCATCCAGCAGGAAATCTTCATGGTGAAGGAATGCACACACCAAAATATTGTGGCCTACTTTGGAAGCTACCTTTGCCGGGAGAAACTGTGGATTTGCATGGAGTACTGTGGTGGAGGCTCCCTCCAGGACATCTACCATGTAACTGGACCGCTTTCAGAGCCTCAGATCGCCTATGTCTGCAGAGAAACATTACAGGGCCTTGGCTATCTTCACTCCAAGGGTAAAATGCACCGAGACATCAAGGGAGCTAATATTCTGCTGACAGACAATGGGGATGTAAAGTTAGctgATTTTGGAGTTGCAGCCAAAATTACAGCAACCATTGCTAAGAGAAAGTCTTTTATTGGAACTCCTTACTGGATGGCTCCTGAGGTGGCAGCAGTGGAGAAAAATGGGGGCTATAACCAGCTGTGTGACATCTGGGCAGTGGGCATAACATCCATCGAGCTGGCCGAGTTGCAGCCCCCCATGTTCGACCTCCATCCCATGAGAgccttgtttttaatgtcaaagAGTAGCTTCCAGCCACCCAAgctaaaagacaaaacaaaatggTCTCCAGCCTTCCAAAACTTCATAAAAGTCTCCCTGACAAAGAACCCGAAGAAGAGGCCTACAGCAGAGAAGCTTCTCTCGCACGTGTTCGTAGCTCAGAATGGCCTTACCAGAAGGATGGCTGTGGAGCTTTTAGACAAAATGAACAACCCGGACAACCACCCCCACTACACTGAGGTGGACGATGACGACCTGGAGcccCTCTCTGCTGTTCGACACACCATTCGCTCTACAAACAAGAACGGCAGAGCAGAGAGGACTCGCTCAGAAATTAACTTTGACAAGGTGCAGTTTGAACCTCCGCTGAGAAAAGAGACCGAAGCTCACACAGAAATGGACTTGACCAAAGAGAATGACTTTCCGTCTCCTTGGAGTCCTTTCTCTGATGGAGGAATGAATAGCAAGAGCCTTCTCAAAAGCGTTGAGGAGGAGTTATTCCAACGTCGAGAAGGAATTGGGAAGGGCTGCAACTTGAAACATGAAGACGAGGGGGTTGCACATGTCTCGATAAGGAAGCAGGCGGGGGCAGGCAGCAAGCTGGTGGCCCGGTGCTGGGGACACGTTGCCCTTCTGGATGACACCTTTGAAGATGTGGATCTctCCACCTTGAAGCAAGGAGTCCCTCCCCCTCTACCTCCAAAGCCGCGGTTAAACAGCAACTCAGAAGAGGGGTGTCTGGACGAGGACAGGAGTCTGACAGTCCGGCGGCTCCCCAGCTCCGACAATGGGCCGACCCAGGGACTGCGCCGACTGAGTACCCCCGTACAGGGCAGCCAGGCTGAGCACTCCCCCCCCGGATACCTGTCTGCCAGCGTCAGCAGCCCCGGACTGCTCTCCCGCTCCACCGACCCAGACAACGAGGAGACGAACGCAGATGTGAACGGGGATAGCTCCAGACAGGCCCCCGCGCCTCCCCAGAGGAAAGAGAAGAAGGAGTTCCCTAAGCCAGCAATCAACGGGCTTCCACCAACACCCAAAGTTCTTATGGGCGCATGTTTTTCCAAAGTGTTTGATGGTTGTCCATTGAAGATCAACTGTGCTACATCTTGGATCCACCCTGATACTAAAGACCAATATCTAATCTTTGGGACAGAAGATGGGATTTATACTTTGAACTTGAACGAGTTGCACGAAGCTACTATGGAACAGCTCTTTCCAAGAAGATGCACATGGCTATATGTTATCAACAACAACTTAATGTCTTTATCAGGAAAAACCTTCCAGCTGTATTCCCACAACCTCATCGGGCTCTTTGAGCAGCTTAAGAAGCCGGGCCTGGCAGCTCAGTTCCAGACCCACAGGTTTCCTGATAAGATACTACCCAGGAGATTCGCATTAACAACTAAGATTCCTGATACAAAGGGCTGCCACAAGTGCTGCATAGTGAGAAATCCGTACACTGGGCACAAATACCTGTGTGGAGCCCTGCAGTCTGGGATTGTCTTACTTCAGTGGTACGAGCCGATGCAGAAGTTTATGCTGATAAAGCACTTTGACTTCCCCCTGCCCAGCCCTCTGAAGGTGTTTGAGATGCTGGTGGTGCCGGAACAGGAGTACCCCATGGTGTGCGTGGCCATCAACCAGGGCAGCGAGCCAGGACAGGTGGTGCGCTTCGAGACCATCAACCtcaactcctcctcctcctggtTCACCGAGATCGGCTCAGGAGGACACCAGGTCGATGCCATCCATGTGACGCAGCTGGAGAGAGACACGGTTCTGGTGTGCCTGGACATGTGCCTTCAGGACAGCGTGTTGGCTTTCTGGAAGCATGGCATGCAGGGGAAGAGCTTCAAGTCGAACGAGGCGAGTATTAGTGTTACCCAGGAGATCTCGGATCAAAGCCGGGTCTTCCATTTGCTGGGATCTGACAGggtggtagttctggaGAGTCGGCCCACAGACCACCCCACAGCCCTGAGCAATCTCTACATCTTGGCTGGCCATGAGAACAGTTACTAGACCCGCCGAGGCACCCTGTGAGGAGATGGCTCTTGCTGCCCATGTCCATTGATCCGCTTCCAGCTCTGATATATTCTCTGCAAGGAAAACATGACATGGAAAGGCAGTCTGCTTTTTCCTGTTGcttattttaatctgtgttgGCTTACTGCGGATGCAAAGAGGACAGCACTGGAGAGATGGGAACTGAGAAACCAGCCAAATTAAATTCCAGTAGACGAGAGTCCAATACCATAGTGCAGCCTCCAAGACGCTGCTCCACGGCATCGGCCTTATCCCCACCTGGATGTGCTGGAGCCGAGGCTGTGCTCAGACGGGGACAAACCAGCTGCGTCTCTGGATCTGCGACCTAGCTGCTACTGGAGAAGCCAGTCATGGGCCACTGTGTGGTCAGTCCGATCATGCAGCTTGACAAGAAGCTGTAAAGATGTAGCAGTTAGAGACAAATGAATGCAGAAAACGGTGGTGATGATATAAACACATGAATGCATTCAAGATCAGGTTTGAGAAAGTGCCATAAAAATCTATAAAGTTTTATTGTTTCCTCCATGCTTGTAAACTGCCAGTTTTAGATAGTAGTAGATAAAACGGACAAGCATTTTTTAGTGCAGTGTGGCTAAATTAACGCTAGCAACTGGGGGACTTTCATTCTGTAGAAATGTAGTTTACCAAACTGAAATGGAATGCATATGATAAGTTAATACCATTTTGTACAATGGAATATTTAAACCTTATTTATTAATCAGGCAGTAGTAGGGTATTGTTACTGTAGTTATCTTAATCGTGGACAGGGCCAGCCCTGCCGTCGACAGGGCTCGTAGCTCTTCCTCTGCTGACTAAGAGAAGGTTGCTGAGCAGCTTGggattattttacagctgtataAAATAGTTGCTTCTTCCTGCTTTGTTCTTTTTAGATTTTGAAtatatcatgtaaaatgtttaacttttttttaattgtaacttTTATTCCATATTTGCACCATGTAAGCACTTTTGTAtatctattgttttgttttgtattaaaaaaaaaaa
>TU187853
GTTGCTAATTAAACCTCACTTAATCTCCTATTTTTCATTCACAGGTTACCCAGGAGATCTCGGATCAAAGCCGGGTCTTCCATTTGCTGGGATCTGACAGggtggtagttctggaGAGTCGGCCCACAGACCACCCCACAGCCCTGAGCAATCTCTACATCTTGGCTGGCCATGAGAACAGTTACTAGACCCGCCGAGGCACCCTGTGAGGAGATGGCTCTTGCTGCCCATGTCCATTGATCCGCTTCCAGCTCTGATATATTCTCTGCAAGGAAAACATGACATGGAAAGGCAGTCTGCTTTTTCCTGTTGcttattttaatctgtgttgGCTTACTGCGGATGCAAAGAGGACAGCACTGGAGAGATGGGAACTGAGAAACCAGCCAAATTAAATTCCAGTAGACGAGAGTCCAATACCATAGTGCAGCCTCCAAGACGCTGCTCCACGGCATCGGCCTTATCCCCACCTGGATGTGCTGGAGCCGAGGCTGTGCTCAGACGGGGACAAACCAGCTGCGTCTCTGGATCTGCGACCTAGCTGCTACTGGAGAAGCCAGTCATGGGCCACTGTGTGGTCAGTCCGATCATGCAGCTTGACAAGAAGCTGTAAAGATGTAGCAGTTAGAGACAAATGAATGCAGAAAACGGTGGTGATGATATAAACACATGAATGCATTCAAGATCAGGTTTGAGAAAGTGCCATAAAAATCTATAAAGTTTTATTGTTTCCTCCATGCTTGTAAACTGCCAGTTTTAGATAGTAGTAGATAAAACGGACAAGCATTTTTTAGTGCAGTGTGGCTAAATTAACGCTAGCAACTGGGGGACTTTCATTCTGTAGAAATGTAGTTTACCAAACTGAAATGGAATGCATATGATAAGTTAATACCATTTTGTACAATGGAATATTTAAACCTTATTTATTAATCAGGCAGTAGTAGGGTATTGTTACTGTAGTTATCTTAATCGTGGACAGGGCCAGCCCTGCCGTCGACAGGGCTCGTAGCTCTTCCTCTGCTGACTAAGAGAAGGTTGCTGAGCAGCTTGggattattttacagctgtataAAATAGTTGCTTCTTCCTGCTTTGTTCTTTTTAGATTTTGAAtatatcatgtaaaatgtttaacttttttttaattgtaacttTTATTCCATATTTGCACCATGTAAGCACTTTTGTAtatctattgttttgttttgtattaaa

Function

symbol description
map4k5 Predicted to enable MAP kinase kinase kinase kinase activity. Predicted to act upstream of or within protein phosphorylation. Orthologous to human MAP4K5 (mitogen-activated protein kinase kinase kinase kinase 5).

NR:

description
PREDICTED: mitogen-activated protein kinase kinase kinase kinase 5 isoform X5

GO: NA

KEGG:

id description
K04406 MAP4K3, GLK; mitogen-activated protein kinase kinase kinase kinase 3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000285 True 4540 mRNA 0.51 34 9440061 9486689
TU187853 False 1215 lncRNA 0.43 2 9483359 9486681

Neighbor

gene id symbol gene type direction distance location
AMCG00000277 LOC106517965,LOC107602930 coding upstream 12519 9414677 ~ 9427542 (+)
AMCG00000278 NA coding upstream 27729 9378563 ~ 9412332 (+)
AMCG00000274 pygl,LOC104938237 coding upstream 76627 9355981 ~ 9363434 (+)
AMCG00000273 trim9,LOC102776798 coding upstream 84913 9331536 ~ 9355148 (+)
AMCG00000271 NA coding upstream 283119 9121065 ~ 9156942 (+)
AMCG00000287 cdkl1 coding downstream 1228 9487917 ~ 9501368 (+)
AMCG00000288 l2hgdh coding downstream 15004 9501693 ~ 9508924 (+)
AMCG00000280 NA coding downstream 70829 9557518 ~ 9560476 (+)
AMCG00000283 NA coding downstream 202058 9688747 ~ 9705449 (+)
AMCG00000282 NA coding downstream 235201 9721890 ~ 9747008 (+)
G149253 NA non-coding upstream 154910 9280063 ~ 9285151 (+)
G149172 psmc6 non-coding upstream 423910 9013371 ~ 9016151 (+)
G149059 NA non-coding upstream 766275 8668980 ~ 8673786 (+)
G149056 NA non-coding upstream 855094 8584488 ~ 8584967 (+)
G149055 NA non-coding upstream 856054 8583648 ~ 8584007 (+)
G149359 LOC103376870 non-coding downstream 233258 9719947 ~ 9776988 (+)
G149416 slc39a9,LOC107721951,LOC107664419 non-coding downstream 471024 9957713 ~ 9962571 (+)
G149415 NA non-coding downstream 486359 9973048 ~ 9975172 (+)
G149450 NA non-coding downstream 534733 10021422 ~ 10021853 (+)
G149454 NA non-coding downstream 543005 10029694 ~ 10030786 (+)
AMCG00000249 acta1,actc1,LOC103383882,LOC105024319 other upstream 854788 8579717 ~ 8585273 (+)
AMCG00000251 NA other upstream 864937 8572936 ~ 8575124 (+)
AMCG00000217 gpx2 other upstream 2077354 7359278 ~ 7362707 (+)
AMCG00000215 max,LOC107668248,LOC103457350 other upstream 2115610 7313872 ~ 7324451 (+)
AMCG00000216 srsf5b,srsf5,LOC107093669,LOC100707620,LOC102304179,LOC102202212,LOC103457348,LOC105936365,LOC105024333,LOC107756601,LOC107602033,LOC103029514,LOC103359433,LOC108233477 other upstream 2143096 7290666 ~ 7296965 (+)
AMCG00000286 sos2 other downstream 28133 9514822 ~ 9546411 (+)
AMCG00000281 cpsf2,LOC106608196 other downstream 74868 9561557 ~ 9591088 (+)
G149424 NA other downstream 482635 9969324 ~ 9970801 (+)
G149525 LOC100846954,LOC107575789 other downstream 1047901 10534590 ~ 10535137 (+)
AMCG00000352 NA other downstream 2478866 11965555 ~ 11995026 (+)

Expression


Co-expression Network