G148396


Basic Information

Item Value
gene id G148396
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 5353951 ~ 5354185 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU186749
taaaccatccctaactacaaaacaaacactaacaataacagtaaatgcccgggtcggtggagccgaacaccgggcaaacagaagcacgacaggggcaaggcaggttcgtagtcacagtccgtaatcaaagtttgttaccggtgggaggttgtcagacagtccggggtttaagagggagaatggtccaggtccagaataagggtcgtaagccagtgaatccatcaactgtgaactt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU186749 True 235 lncRNA 0.49 1 5353951 5354185

Neighbor

gene id symbol gene type direction distance location
AMCG00000148 NA coding upstream 24918 5320345 ~ 5329033 (+)
AMCG00000139 itpk1,LOC106597151 coding upstream 116664 5207350 ~ 5237287 (+)
AMCG00000137 NA coding upstream 182525 5170061 ~ 5171426 (+)
AMCG00000135 NA coding upstream 231721 5117082 ~ 5122230 (+)
AMCG00000159 unc79,LOC106586068 coding upstream 268004 4940648 ~ 5085947 (+)
AMCG00000147 cdca4,LOC106599634,LOC106610950 coding downstream 21430 5375615 ~ 5380159 (+)
AMCG00000141 NA coding downstream 36140 5390325 ~ 5395773 (+)
AMCG00000143 NA coding downstream 109764 5463949 ~ 5470513 (+)
AMCG00000155 ttc9 coding downstream 178425 5532610 ~ 5535596 (+)
AMCG00000170 NA coding downstream 481301 5835486 ~ 5844974 (+)
G148200 NA non-coding upstream 771400 4582311 ~ 4582551 (+)
G148146 mthfd1,LOC106952296,LOC105908326,LOC103136077 non-coding upstream 1178235 4173437 ~ 4175716 (+)
G148143 NA non-coding upstream 1191640 4160855 ~ 4162311 (+)
G148119 NA non-coding upstream 1340548 4011654 ~ 4013403 (+)
G148075 NA non-coding upstream 1474430 3876371 ~ 3879521 (+)
G148402 NA non-coding downstream 28383 5382568 ~ 5388814 (+)
G148452 NA non-coding downstream 186494 5540679 ~ 5544478 (+)
G148459 NA non-coding downstream 323798 5677983 ~ 5678620 (+)
G148468 actn1,LOC100696265,LOC101469024,LOC106600942 non-coding downstream 361408 5715593 ~ 5719481 (+)
G148519 NA non-coding downstream 497460 5851645 ~ 6045324 (+)
AMCG00000146 NA other upstream 13401 5334513 ~ 5340550 (+)
AMCG00000145 NA other upstream 38998 5307190 ~ 5314953 (+)
AMCG00000136 btbd7 other upstream 192756 5088439 ~ 5161195 (+)
AMCG00000113 NA other upstream 1160918 4112120 ~ 4193033 (+)
G148040 NA other upstream 1593327 3760179 ~ 3760624 (+)
AMCG00000142 NA other downstream 80973 5435158 ~ 5454206 (+)
AMCG00000166 srsf5,LOC106602985,LOC106611464 other downstream 526838 5881023 ~ 5888027 (+)
AMCG00000175 NA other downstream 646726 6000911 ~ 6011397 (+)
AMCG00000201 NA other downstream 1115160 6469345 ~ 6474232 (+)
AMCG00000198 LOC106586563 other downstream 1146708 6500893 ~ 6520863 (+)

Expression


Co-expression Network