G148656


Basic Information

Item Value
gene id G148656
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 6306628 ~ 6306867 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU187052
cttagattttcaaaaagcttttgataaggttccacaccaaagactgatcctcagattggaagctgtaggcattcagggtaatgtaagtagatggattatgaactggttgatgtataggaaacagagggtgttgattagaggagttgcttctaactggagtgaggttgttagtggagttccacagggatcagtactagggcctttgctttttctaatctgtattaatgatctggactctgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU187052 True 240 lncRNA 0.41 1 6306628 6306867

Neighbor

gene id symbol gene type direction distance location
AMCG00000183 NA coding upstream 23571 6279548 ~ 6283057 (+)
AMCG00000185 NA coding upstream 136540 6157794 ~ 6170088 (+)
AMCG00000186 dnajc17 coding upstream 197491 6098493 ~ 6109137 (+)
AMCG00000174 NA coding upstream 272364 6031289 ~ 6034264 (+)
AMCG00000173 NA coding upstream 312960 5984559 ~ 5993668 (+)
AMCG00000181 NA coding downstream 50261 6357128 ~ 6364974 (+)
AMCG00000202 actc1a,actc1,act2,LOC105024319,LOC100194557 coding downstream 250975 6557842 ~ 6562820 (+)
AMCG00000200 NA coding downstream 257484 6564351 ~ 6574765 (+)
AMCG00000199 scg5,LOC107721259 coding downstream 269412 6576279 ~ 6587927 (+)
AMCG00000203 LOC106571103 coding downstream 283716 6590583 ~ 6591140 (+)
G148631 cyp1c1,cyp1c2,cyp1c3,LOC106610849 non-coding upstream 90169 6215756 ~ 6216459 (+)
G148618 LOC107745367 non-coding upstream 91868 6207353 ~ 6214760 (+)
G148609 NA non-coding upstream 158343 6147922 ~ 6148285 (+)
G148519 NA non-coding upstream 261304 5851645 ~ 6045324 (+)
G148545 chp1 non-coding upstream 276851 6018043 ~ 6029777 (+)
G148764 NA non-coding downstream 616427 6923294 ~ 6927254 (+)
G148768 NA non-coding downstream 626433 6933300 ~ 6935160 (+)
G148791 NA non-coding downstream 785158 7092025 ~ 7092460 (+)
G148919 NA non-coding downstream 1377011 7683878 ~ 7684097 (+)
G148961 NA non-coding downstream 1452502 7759369 ~ 7759597 (+)
AMCG00000175 NA other upstream 295231 6000911 ~ 6011397 (+)
AMCG00000166 srsf5,LOC106602985,LOC106611464 other upstream 418601 5881023 ~ 5888027 (+)
AMCG00000142 NA other upstream 852422 5435158 ~ 5454206 (+)
AMCG00000146 NA other upstream 966078 5334513 ~ 5340550 (+)
AMCG00000145 NA other upstream 991675 5307190 ~ 5314953 (+)
AMCG00000201 NA other downstream 162478 6469345 ~ 6474232 (+)
AMCG00000198 LOC106586563 other downstream 194026 6500893 ~ 6520863 (+)
AMCG00000216 srsf5b,srsf5,LOC107093669,LOC100707620,LOC102304179,LOC102202212,LOC103457348,LOC105936365,LOC105024333,LOC107756601,LOC107602033,LOC103029514,LOC103359433,LOC108233477 other downstream 983799 7290666 ~ 7296965 (+)
AMCG00000215 max,LOC107668248,LOC103457350 other downstream 1007005 7313872 ~ 7324451 (+)
AMCG00000217 gpx2 other downstream 1052411 7359278 ~ 7362707 (+)

Expression


Co-expression Network