G148919


Basic Information

Item Value
gene id G148919
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 7683878 ~ 7684097 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU187384
TCAGGTGTGAAGTGCCTCTAGCACCTATGGAGGCAGCTGTGTATCTCGGGCTCCTCTCCCAGCAGGGTGCTGAGTTTTAGACTGCATCTCTATTCACATGCTCTCCTCATAGGTGGTCCCATTCTcaggaaagtattttacaaGGCAGTAAAGAGACAAACTAGCCTTAGATGCAGGCTTTCATTTTGTCTTCGCTGTGACTCTCttgcatttgcattgc

Function

NR:

description
PREDICTED: phosphate carrier protein, mitochondrial-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU187384 True 220 lncRNA 0.48 1 7683878 7684097

Neighbor

gene id symbol gene type direction distance location
AMCG00000235 NA coding upstream 9311 7663322 ~ 7674567 (+)
AMCG00000233 dcaf4 coding upstream 30550 7643721 ~ 7653328 (+)
AMCG00000234 LOC108424512,LOC102778868 coding upstream 115285 7554088 ~ 7568593 (+)
AMCG00000211 LOC105936451 coding upstream 223075 7435285 ~ 7460803 (+)
AMCG00000214 NA coding upstream 324842 7350800 ~ 7359036 (+)
AMCG00000220 vps18,LOC106571062,LOC107739368 coding downstream 6473 7690570 ~ 7697131 (+)
AMCG00000221 ino80,LOC107668207,LOC107739367,LOC107721325 coding downstream 18722 7702819 ~ 7740807 (+)
AMCG00000238 NA coding downstream 187433 7871530 ~ 7886444 (+)
AMCG00000232 meis2 coding downstream 424521 8108618 ~ 8120105 (+)
AMCG00000247 dph6 coding downstream 740487 8424584 ~ 8426636 (+)
G148791 NA non-coding upstream 591418 7092025 ~ 7092460 (+)
G148768 NA non-coding upstream 748718 6933300 ~ 6935160 (+)
G148764 NA non-coding upstream 756624 6923294 ~ 6927254 (+)
G148656 NA non-coding upstream 1377011 6306628 ~ 6306867 (+)
G148631 cyp1c1,cyp1c2,cyp1c3,LOC106610849 non-coding upstream 1467419 6215756 ~ 6216459 (+)
G148961 NA non-coding downstream 75272 7759369 ~ 7759597 (+)
G149001 NA non-coding downstream 271875 7955972 ~ 7956389 (+)
G149055 NA non-coding downstream 899551 8583648 ~ 8584007 (+)
G149056 NA non-coding downstream 900391 8584488 ~ 8584967 (+)
G149059 NA non-coding downstream 984883 8668980 ~ 8673786 (+)
AMCG00000217 gpx2 other upstream 321171 7359278 ~ 7362707 (+)
AMCG00000215 max,LOC107668248,LOC103457350 other upstream 359427 7313872 ~ 7324451 (+)
AMCG00000216 srsf5b,srsf5,LOC107093669,LOC100707620,LOC102304179,LOC102202212,LOC103457348,LOC105936365,LOC105024333,LOC107756601,LOC107602033,LOC103029514,LOC103359433,LOC108233477 other upstream 386913 7290666 ~ 7296965 (+)
AMCG00000198 LOC106586563 other upstream 1163015 6500893 ~ 6520863 (+)
AMCG00000201 NA other upstream 1209646 6469345 ~ 6474232 (+)
AMCG00000251 NA other downstream 888839 8572936 ~ 8575124 (+)
AMCG00000249 acta1,actc1,LOC103383882,LOC105024319 other downstream 895620 8579717 ~ 8585273 (+)
AMCG00000285 map4k5 other downstream 1755964 9440061 ~ 9486689 (+)
AMCG00000286 sos2 other downstream 1830725 9514822 ~ 9546411 (+)
AMCG00000281 cpsf2,LOC106608196 other downstream 1877460 9561557 ~ 9591088 (+)

Expression


Co-expression Network