AMCG00001394


Basic Information

Item Value
gene id AMCG00001394
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 1722432 ~ 1893698 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001394
ATGTGGTGCTCCCATCTGTGTAGTTCGTACTCCGGCTGCGGTAAAGCGCATGATGTTAACAAGCAACACAGAGCCAAGTTAAATTCACGAAAGTACGAGGAGAGCCTGACTATGGGCATTGTCCCCCTCATAATCCACActgggaaaataaacacaaccctGGTTACAGGCGTAACAGGGGCAGACGTGACCATGCTGGAGATCAGACTCACACTGACCAAACTGTCAAACAGACAGGCCAGGACACCCCAAGGGGCGGTGCCTGATGTGACTCCTCCCACCTACGAAGAGTCAAAGGCAGAACTGGCTCCTCCTCTGTACTCAACTCCTCCCCTGTATCCGCAGGATGAGCAATTGCTACTGCGACAGCAAGTCCAACAACTGCGCATTGATCTCATAGAGAAAGCAGCCCATGCACAGCAAGCATATGGtTGTGGTAAGAAGTCAGTTTCCATAAAGTTTTGGATGGAAAAAAGTCAAGAGCTGGTGACCGGCCACAAAGACAGCTATATTACTGGGTTTATTGTACCTGTGGTCATCCTGTGCTACTTCTACTATCAGATTGTGCATTTCCTCAGGAATAAGGATGATATTTTTGAGACCACTTCCTTTCGGCGATCCCAGAAACTGGTCATCCTTGCAGTTACTATGATTCTTGTGTTATACACTCCATACCACATCATGAGAAACATCCGCATCACTACACGCATGGAGGAACCACTGACATTCCCTTTGATGGTGCCACTGAAATCCCCAGGGTCTCAAAAGGAGGAGCCAGTGACTCTTCAACAGCCCGAGCCAGAGGAAGAACATCGAAGAGGAGGAAGACTAGCCAGCAGTGCCAGAGCCGGTGGCGGTGCTAGAGCAATAACGGAAGGAACAGTTATTTCTCAAGAGACCCCCAATGATGAAGATGACAAGAACGAGGTAGAAGTGCCAGAGCTGGAGTGGGAGGAAGAAGAATTCCTCCCAGTGATTGGAGAGGAGGACATGGAGCTTCCTGAATATCCAGGCACAGGCTCACCAGAGGACCCAGAAAAGGCACCACCAGAACAGGAGAGCCTTATGCAATTGCCATGGTGGGGGGCAGTCTTCTACTTCCTTTCCCTCCACCCCTGCTTGCCTGTTCTGCACTGCCTTGCTCCCCTGGGTCCCTCCATCCTTGGATCCCGGAGAATCCAGGATGTGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001394 True 1191 mRNA 0.50 7 1722432 1893698

Neighbor

gene id symbol gene type direction distance location
AMCG00001393 NA coding upstream 54729 1655576 ~ 1667703 (+)
AMCG00001388 NA coding upstream 84520 1632813 ~ 1637912 (+)
AMCG00001391 klc4,LOC108263390,LOC102210354 coding upstream 122445 1576221 ~ 1599987 (+)
AMCG00001389 NA coding upstream 186193 1507240 ~ 1536239 (+)
AMCG00001390 LOC106933308,LOC103137645,LOC102233463,LOC106963892 coding upstream 240518 1478128 ~ 1481914 (+)
AMCG00001395 NA coding downstream 126625 2020323 ~ 2022140 (+)
AMCG00001399 NA coding downstream 163189 2056887 ~ 2058997 (+)
AMCG00001400 NA coding downstream 183055 2076753 ~ 2104545 (+)
AMCG00001407 NA coding downstream 318553 2212251 ~ 2218503 (+)
AMCG00001403 tmem178,LOC107691291,LOC105026821,LOC107751123,LOC107570655,LOC106564792 coding downstream 486546 2380244 ~ 2393334 (+)
G157327 NA non-coding upstream 10617 1708945 ~ 1711815 (+)
G157256 NA non-coding upstream 617916 1101909 ~ 1104516 (+)
G157247 NA non-coding upstream 767458 954595 ~ 954974 (+)
G157244 NA non-coding upstream 782951 939239 ~ 939481 (+)
G157231 NA non-coding upstream 926875 795318 ~ 795557 (+)
G157361 NA non-coding downstream 3376 1897074 ~ 1897280 (+)
G157372 NA non-coding downstream 110435 2004133 ~ 2083118 (+)
G157373 NA non-coding downstream 113622 2007320 ~ 2011467 (+)
G157461 LOC100846954 non-coding downstream 521818 2415516 ~ 2415966 (+)
G157473 NA non-coding downstream 611878 2505576 ~ 2505911 (+)
AMCG00001392 NA other upstream 27446 1691676 ~ 1694986 (+)
G157196 NA other upstream 1133132 587975 ~ 589300 (+)
G157369 NA other downstream 78183 1971881 ~ 2000928 (+)
AMCG00001436 gng4 other downstream 1854856 3748554 ~ 3765362 (+)
G157781 NA other downstream 1981511 3875209 ~ 3880779 (+)
AMCG00001433 NA other downstream 2129099 4022797 ~ 4023910 (+)
AMCG00001430 srf other downstream 2151658 4045356 ~ 4062333 (+)

Expression


Co-expression Network