AMCG00001501


Basic Information

Item Value
gene id AMCG00001501
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 6194262 ~ 6198251 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001501
GAAGATGCAGAAACACACAACTGGTCACTCCCCCTGGTACCTTTTTATCATTTTGAATGGGTGAATTAGTATGGGGAGGGTGACTTTGTTCTGCAAAATCAAATCCGTGCGATATAAAAGGATGTCATGTAAATAATGTCAATTCCTGTTTTTCTCCCTACCTGTGCACTGGTGCGCACAATGGAAGGGTTAGCCTTTTACCACCAATGCGCTTTATCTGCATTCCTCCTGTGCCTCCTACAAACCCATCCTGCACAGAGTCTGGCGAGTCCAGTTCTACAGGAGGAAATCACACCAAAAGACCTGATGTTTCGCTCCATTGACTATAAAAACGTCCTGCACTGGAAACCTGGGAAGGGGATTTACAATGGgaaagcagtttattttgtaCAGCACAAAATCTATGGAGAGAAGCAGTGGACCAACGCAACTCACTGTCTGGGCATCACCAAGATGTCCTGTGACCTCAGTCAGGAGACCTCCGATCGGCGAGAGTTTTACTACGCCCGAGTCCAAGCAGCCCTGTCTGGGGTGCACTCCCCCTGGGTGCTCAGCCAGAGATTTGTTCCACAGTGGGAGACGTTCTTCAGCCCTCCGAAGGTGAAGCTGGCGGCCAAGGAGCGGAGCATTCTGGTCCATCTCAGGCCACCTCACTCCCCCTACAGACGGAGGAAGGGCGGGTGGATATCGATGAAGAAGCTTCACAAGTTTAATTACAGGATATATGTCTCTCACGGCAACATTACCATGGAGAAACATGTCTTTCAGGGCTCTGTAAGCAAAGTATTGATCGTTAATCTGAGACCCAGGATGACCTACTGTGTCCAGGCCGAAGCCACCATTGAGCTGTACAGCCGAACCAGCAAGAGGAGCCGGAAAATATGTATCTCACTGTGAGGGTAAACCGCTGGATGCAGGacgtttttgttgtgtttgacAGTCTGTCACGACCAGAAGAATCCACGTCGACCATGTGTCGCCGGACCACCTGATGAACTAACTGCCGATCCGTTCGGGTCTTACCTCAACCGCTGCACTGCCTGTGTGATAATTTACCGTTTGGGGGGATTTCTTTGAACCACTGCCACTGGATGCACATTTCCGATTCATTGTTTTACTCTTTTACCTGTTGTATTTACTAAAACCAACCCAGGATGCAATTTACTTAACAGAAAATGCTTTTCACTGAACTTTGGCTGCTGATAAGAATTCATATTTATCTCAATTTCATGTCTATTTCGCATAAAATCATGAATGGAGAAACCAGGCAGATAACACACTGATATACCATTAACCTgctcacattattttcaataacagGAACAGCTCTCACATGAAATCATTTAGTTCCCAAATGTAATTGACGCTGTTATTTATAGATGTTACTGTTGCAGTGAAACTGATTTGACGCATCCTCTGTAAACGCTGTGTGTAAcgtcacattttcttttctacttTTGTCGGGATATCTGAAATGATGCGAAGGCTGGgaactgaaaataagtaatttggTGTTGtcatcaattaaataaagtattacatCTTT

Function

GO: NA

KEGG:

id description
K05139 IL22RA2; interleukin 22 receptor alpha 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001501 True 1546 mRNA 0.45 6 6194262 6198251

Neighbor

gene id symbol gene type direction distance location
AMCG00001500 NA coding upstream 2290 6185200 ~ 6191972 (+)
AMCG00001497 LOC107578948,LOC107682299 coding upstream 107922 6085600 ~ 6086340 (+)
AMCG00001498 NA coding upstream 192635 5990262 ~ 6001627 (+)
AMCG00001488 vip,LOC107597641,LOC107679148,LOC107655780,LOC107585469 coding upstream 367767 5819606 ~ 5826495 (+)
AMCG00001477 acoxl coding upstream 636795 5537336 ~ 5557467 (+)
AMCG00001510 NA coding downstream 27744 6225995 ~ 6253221 (+)
AMCG00001511 NA coding downstream 183716 6381967 ~ 6383208 (+)
AMCG00001512 NA coding downstream 343422 6541673 ~ 6545924 (+)
AMCG00001507 pgbd5,LOC107743535,LOC107552948,LOC107725485,LOC106589661,LOC106610742 coding downstream 365557 6563808 ~ 6591290 (+)
AMCG00001515 LOC107580738 coding downstream 537846 6736097 ~ 6741940 (+)
G158230 NA non-coding upstream 302016 5892046 ~ 5892246 (+)
G158184 NA non-coding upstream 459703 5708092 ~ 5734559 (+)
G158104 NA non-coding upstream 771170 5421471 ~ 5423092 (+)
G158089 NA non-coding upstream 879026 5313068 ~ 5315236 (+)
G158014 NA non-coding upstream 1305910 4888114 ~ 4888352 (+)
G158332 NA non-coding downstream 198669 6396920 ~ 6398188 (+)
G158337 NA non-coding downstream 210770 6409021 ~ 6410557 (+)
G158342 NA non-coding downstream 223749 6422000 ~ 6422235 (+)
G158364 NA non-coding downstream 311043 6509294 ~ 6509630 (+)
G158435 NA non-coding downstream 589153 6787404 ~ 6788972 (+)
AMCG00001493 NA other upstream 293264 5889836 ~ 5900998 (+)
AMCG00001489 NA other upstream 322832 5869975 ~ 5871430 (+)
AMCG00001486 NA other upstream 560913 5593680 ~ 5633349 (+)
AMCG00001480 NA other upstream 811198 5366005 ~ 5383064 (+)
AMCG00001457 NA other upstream 1542262 4623467 ~ 4652000 (+)
AMCG00001509 sf3b5 other downstream 195852 6394103 ~ 6395960 (+)
G158478 NA other downstream 676517 6874768 ~ 6876578 (+)
G158537 NA other downstream 825137 7023388 ~ 7028141 (+)
AMCG00001550 NA other downstream 1473063 7671314 ~ 7679783 (+)
G158672 NA other downstream 1538264 7736515 ~ 7737890 (+)

Expression


Co-expression Network