AMCG00001606


Basic Information

Item Value
gene id AMCG00001606
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 8659527 ~ 8665661 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001606
ATGACAGAGATTGTGGAGCTGGAAGAACGCCTCAATGCACAGTTAGAGACATTCTTCAGAGTGGACCTATTTCAGTTCAAAAACGCAAAGGACCACTACGTCCAGTTAAGTGCCAAGAAGGCGGCGCTGCAGGAGCCCGCCCAGGCCCCAGTAAACCATCGCTACAAGGCAGAGAAGGGGCTCAGACGAGCTGCACTGTGCTATGGCCATCAGctGGACCAGCTGTTTGACGTCACAGCAAAGGACATTGAGGCCATTAAAAAGACATATCCCACCACCCAGAAGAAGGTGATGGAGAGCACCTCTGAGCCAAACCAGGCCCAGCTCGCTGCCCCCGCTTCTGAAAGCGAGGCGCTCCAGCACCCCCTAGCCGAGGAGACTGAGAAGAAGCTGGATGCCGAGAACATTGACCCCGAGGCTCTCAAGCCTGGAGACCATAAATCCCAGTCCAGAGAAGCTCCAAAGTCTGGACAGCCCTCTACCGGCACCCTGAACCGATGCGCCGCCCTGCAGCAGTCGTCCTCCGTAGACAATGATGCACGGAGAGTCCCGCATAGGCTGTGTCCACCCCTCCTCCTGCCCCTGCCAAAAGCCACCCTGAGCGAGGATGGCATGGACAAGAAGTCAAAGGCCATCATTGAGGAGTATCTCCACATCAATGACATGAAGGAAGCCCTGCAGTGCGTCCAGGAGCTGGACTCTGAGCCGCTGCTCTTTGTGTTCGTGCGCAACGGCATCGAGTCGTCATTGGAGCGCAGCACCATTGCGCGGGAACGCATGGGCCTGCTGCTCTACCAGCTGCTCAAGGCTGGCACTCTGCCCACTGAGCAGTACTACAAAGGGCTGCAGGAAGTCATGGAGGTGGCAGAAGACATGGCCATTGACATCCCTTACATCTGGCAGTACCTGGCAGAGATCATCGCACCCATGCTGCACGAGGGGGGCATTGCCATGGCCGAACTCTTCAAGGATGTGTCCAAGCCCCTGATTCCCCTGGGCAAAGCTGGCATCTTACTGGTGAAGATTGTGTCCTTACTTTTCAAAAGAATGAGCCACGAGAAAACCGGTGCCCTGTGGAAAGATGCCGAATTGGTCTGGAAGGACATCCTGCCCGAGAGTGACGATATCAACACGTTTGTGGCGGAGAcggcttcatttaaaaaataa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001606 True 1167 mRNA 0.56 10 8659527 8665661

Neighbor

gene id symbol gene type direction distance location
AMCG00001599 LOC106564825,LOC108430145 coding upstream 28066 8606654 ~ 8631461 (+)
AMCG00001602 strn,LOC102790911,LOC102314492 coding upstream 84510 8570684 ~ 8575017 (+)
AMCG00001600 heatr5b coding upstream 91571 8541363 ~ 8567956 (+)
AMCG00001585 irf2bp2,LOC104918200 coding upstream 282117 8374285 ~ 8377410 (+)
AMCG00001588 tomm20,LOC103383373,LOC100703030,LOC103375291 coding upstream 344175 8311527 ~ 8315352 (+)
AMCG00001605 LOC106564822,LOC106586224 coding downstream 72811 8738472 ~ 8740022 (+)
AMCG00001603 memo1,LOC107654980,LOC107705412 coding downstream 82635 8748296 ~ 8758510 (+)
AMCG00001604 NA coding downstream 97460 8763121 ~ 8774091 (+)
AMCG00001610 NA coding downstream 139660 8805321 ~ 8815317 (+)
AMCG00001614 NA coding downstream 281752 8947413 ~ 8966738 (+)
G158857 NA non-coding upstream 354687 8302550 ~ 8304840 (+)
G158837 NA non-coding upstream 402338 8165773 ~ 8257189 (+)
G158823 mrpl14 non-coding upstream 557112 8101451 ~ 8102415 (+)
G158788 NA non-coding upstream 620986 8035301 ~ 8038541 (+)
G158771 NA non-coding upstream 659815 7997910 ~ 7999712 (+)
G159041 NA non-coding downstream 111276 8776937 ~ 8777745 (+)
G159101 NA non-coding downstream 544459 9210120 ~ 9214347 (+)
G159142 NA non-coding downstream 650450 9316111 ~ 9369910 (+)
G159170 NA non-coding downstream 1197299 9862960 ~ 9863228 (+)
G159169 NA non-coding downstream 1203507 9869168 ~ 9869603 (+)
G158836 NA other upstream 497712 8159146 ~ 8161815 (+)
G158725 kat14,LOC106584902 other upstream 725972 7933156 ~ 7933555 (+)
G158676 NA other upstream 912547 7746681 ~ 7746980 (+)
G158672 NA other upstream 921637 7736515 ~ 7737890 (+)
AMCG00001550 NA other upstream 979744 7671314 ~ 7679783 (+)
G159174 NA other downstream 1247647 9913308 ~ 9914664 (+)
AMCG00001630 NA other downstream 1492073 10157734 ~ 10159826 (+)
AMCG00001643 spred2 other downstream 1989526 10655187 ~ 10677854 (+)
AMCG00001645 NA other downstream 2081828 10747489 ~ 10757858 (+)
AMCG00001691 NA other downstream 3664318 12329979 ~ 12333700 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
mexican tetra (Astyanax mexicanus) G5095 eif4g1 unknown NC_035897.1 CM008300.1 20630225 ~ 20637068 (-)