AMCG00001610


Basic Information

Item Value
gene id AMCG00001610
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 8805321 ~ 8815317 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001610
GGGAGCACTTTCGCCTCGCAGCTTACTTTATGAAAAGGCATGTCAATCTGAGGTGCATTGTGAAGCAGCAATTCCGGGAGCTCCGTGTGTTTCCTGAACGCTTCACGGTTTTTATGAGTCTTCCAGAAGAGGTACCAGGACCCCGGGGAAACGAGGACCCCACCAAGATGGAGCAGAACGGCAGAAGCACATCGGAATATTTTTCCAGTCCCTTTGAAACCGAAGAACCATTAAACAGCTCCAAAATAACAAAGAGGAACACCCTCAAGAAAATtgcaaaacaagcaaacagccGAGCCGACCCCACAAGCAAGACCGCGGAGGAGCCGCCCACGGCTGCCACTGCGACGGGGCGAGGGCCGGGGAGGGACGTGCCCCTCGGCTCCCGGGACGCCAGACCCAGAGTTCAGGACATCAACGCGGGAGGACCGGAGGAGGCCAGGAGAACAAACAAAGTTCAAAGCAGCTCCCAGCTTCCTTTTTCTGAGCTGGGAAGCAGCACCGGCGAGAGACAGCCAGATGAGACCGGCGGCCAGAAACAACCCCGTCTCGCGGAGCAGCTGAACGCCGGGCCGCAATGCGGGGTCCCGGCACTGAGGAGTGAGTCAGCAGCACCACAACCGAAACAGAGTCGGGGGAAGAGCAAGAGAGGGGCCTGCTCTCAGGAAGAGGCCGAGGGTGCCAAGAAAGTACGCCTTGGAACGGCTCCAGTATCCCCCAGTGAggtaataatgaaaacagattCTGCTGAGTCTTTAACACAAACATCCACGGAGAAGTCTCCATTGGTATCCAAGTCATGCTCTGCACCAGAATCAGCTGAAACCACAGTGGATGAGGAGTTGCTTACTTTGGGAAAATCGGCCCTGAAACCTCTCCTCGCAAAAAACAACACGGAGCAGACAGACCAAAACCGGCTGGCCACAAGCATAAACGACTTATCTGTCAAGCCTGTATCCTCTCATTCATATATTCGCTCCAGATCCCCAGACAGAAAGGAGGGGGTGGAGAATGTACCCAGAAAATCGAGATTAAGACGAACGAAGAAGTCC

Function

GO:

id name namespace
GO:0006259 DNA metabolic process biological_process

KEGG:

id description
ko04110 Cell cycle
ko04114 Oocyte meiosis
ko04218 Cellular senescence

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001610 True 1052 mRNA 0.54 4 8805321 8815317

Neighbor

gene id symbol gene type direction distance location
AMCG00001604 NA coding upstream 31230 8763121 ~ 8774091 (+)
AMCG00001603 memo1,LOC107654980,LOC107705412 coding upstream 46811 8748296 ~ 8758510 (+)
AMCG00001605 LOC106564822,LOC106586224 coding upstream 65299 8738472 ~ 8740022 (+)
AMCG00001606 NA coding upstream 139660 8659527 ~ 8665661 (+)
AMCG00001599 LOC106564825,LOC108430145 coding upstream 173860 8606654 ~ 8631461 (+)
AMCG00001614 NA coding downstream 132096 8947413 ~ 8966738 (+)
AMCG00001613 btbd3 coding downstream 202549 9017866 ~ 9028794 (+)
AMCG00001617 LOC107600566,LOC107654988,LOC107662809 coding downstream 278452 9093769 ~ 9135363 (+)
AMCG00001616 ism1,LOC107662810,LOC103134171,LOC103134168 coding downstream 334700 9150017 ~ 9155016 (+)
AMCG00001618 ndufaf5 coding downstream 403312 9218629 ~ 9229998 (+)
G159041 NA non-coding upstream 27576 8776937 ~ 8777745 (+)
G158857 NA non-coding upstream 500481 8302550 ~ 8304840 (+)
G158837 NA non-coding upstream 548132 8165773 ~ 8257189 (+)
G158823 mrpl14 non-coding upstream 702906 8101451 ~ 8102415 (+)
G158788 NA non-coding upstream 766780 8035301 ~ 8038541 (+)
G159101 NA non-coding downstream 394803 9210120 ~ 9214347 (+)
G159142 NA non-coding downstream 500794 9316111 ~ 9369910 (+)
G159170 NA non-coding downstream 1047643 9862960 ~ 9863228 (+)
G159169 NA non-coding downstream 1053851 9869168 ~ 9869603 (+)
G159204 NA non-coding downstream 1254613 10069930 ~ 10070334 (+)
G158836 NA other upstream 643506 8159146 ~ 8161815 (+)
G158725 kat14,LOC106584902 other upstream 871766 7933156 ~ 7933555 (+)
G158676 NA other upstream 1058341 7746681 ~ 7746980 (+)
G158672 NA other upstream 1067431 7736515 ~ 7737890 (+)
AMCG00001550 NA other upstream 1125538 7671314 ~ 7679783 (+)
G159174 NA other downstream 1097991 9913308 ~ 9914664 (+)
AMCG00001630 NA other downstream 1342417 10157734 ~ 10159826 (+)
AMCG00001643 spred2 other downstream 1839870 10655187 ~ 10677854 (+)
AMCG00001645 NA other downstream 1932172 10747489 ~ 10757858 (+)
AMCG00001691 NA other downstream 3514662 12329979 ~ 12333700 (+)

Expression


Co-expression Network