AMCG00002060


Basic Information

Item Value
gene id AMCG00002060
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 2248017 ~ 2251139 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002060
ATGGAGATTCAAGACACAATCATGATGAAGTTTGTGGTCCTCGCATTTCTTGTTGCTGGAGCATACGGCTGTGGGCTGCCCACCTTCCCACCCGTGGTGACCAGAGTCGTGGGCGGAGTGGACGCCAGACCCCACAGCTGGCCCTGGCAGGTCGTGAGGAATGGCGACTGGTTTCACACCTGTGGCGGGACCCTGATCGCTCCCAACTGGGTCCTGACCGCTGCTCACTGCATCAGCAGCCGCAACACTTACAGAGTGGCCTTGGGCAAGCACAACCTGAAGCAGGAAGAGGCCGGGTCAGTGACTGTCGACGCTGCCACCATCGTCGTCCATGAGAAGTGGAACAGCCTCTTCATCCGGAATGACATCGCCCTGGTGAAGCTGCAGGAGGCTGTGGTCGCCAGCGATAACATCATGACCGCTTGTCTTCCCGTTGCCGGCTCCACGCTGCCCAACAACGAGCCCTGCTACGTCACTGGCTGGGGCCGCCTGTTCAGTGAGTGGCCCCCAGCGCCCTGGCCTGTCCTGTCCTCTCGCCTTCTCTCCCCCACTGCAGCCAGGGACCTTCTCCAGCCTCACGTGGTGTTGGTGTCGGAGGGCAGGGGTGAAACGCTGTCTGTGCTCGGTGTCTCCTCAGCGAACGGCCCAGCCGCCGAGATCCTGCAGCAGGCTCTCCTGCCCGTCGTTGACCATGTGACCTGCACTCTGCCCGACTGGTGGGGCGGCATGGTGAAGGACACTATGGTGTGTGCTGGAGGAGACGGAGTGGTGTCTGGCTGCAACGGAGACTCCGGCGGCCCTCTGAACTGCCAGCGTGACGGAGTGTGGAGCGTGGAGGGGGTGGTGAGCTTCGGCTCGGGCCTGGGCTGCAACTACCCCAAGAAGCCCACCGTGTTCACCCGTGTCAGCTCTTACATTGACTGGATCAACACCGTGAGTACAGCCGAGCACTTCCCTATCCCTCACTCTCCGGGCTCTTAA

Function

GO:

id name namespace
GO:0008233 peptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002060 True 981 mRNA 0.62 7 2248017 2251139

Neighbor

gene id symbol gene type direction distance location
AMCG00002059 NA coding upstream 27233 2216551 ~ 2220784 (+)
AMCG00002054 NA coding upstream 165729 2081233 ~ 2082288 (+)
AMCG00002051 NA coding upstream 171080 2054731 ~ 2076937 (+)
AMCG00002052 NA coding upstream 215399 2028613 ~ 2032618 (+)
AMCG00002053 NA coding upstream 261628 1985760 ~ 1986389 (+)
AMCG00002075 NA coding downstream 565618 2816757 ~ 2816972 (+)
AMCG00002074 rimkla,LOC106567384 coding downstream 580545 2831684 ~ 2841963 (+)
AMCG00002073 ppcs coding downstream 606528 2857667 ~ 2861786 (+)
AMCG00002080 NA coding downstream 655726 2906865 ~ 2910535 (+)
AMCG00002081 LOC106572212 coding downstream 696327 2947466 ~ 2952329 (+)
G120602 NA non-coding upstream 22037 2225780 ~ 2225980 (+)
G120566 NA non-coding upstream 44646 2202617 ~ 2203371 (+)
G120565 NA non-coding upstream 63037 2184780 ~ 2184980 (+)
G120564 NA non-coding upstream 71575 2174587 ~ 2176442 (+)
G120563 NA non-coding upstream 73518 2173470 ~ 2174499 (+)
G120674 NA non-coding downstream 444925 2696064 ~ 2696407 (+)
G120692 utp3,LOC102785935 non-coding downstream 610776 2861915 ~ 2866024 (+)
G120755 NA non-coding downstream 789428 3040567 ~ 3042435 (+)
G120763 NA non-coding downstream 792501 3043640 ~ 3046804 (+)
G120774 NA non-coding downstream 840655 3091794 ~ 3092899 (+)
G120518 NA other upstream 307201 1924022 ~ 1940816 (+)
AMCG00002019 NA other upstream 1255253 682670 ~ 992764 (+)
AMCG00002076 NA other downstream 601015 2852154 ~ 2854127 (+)
G120742 NA other downstream 705769 2956908 ~ 2959475 (+)
AMCG00002098 NA other downstream 1282675 3533814 ~ 3542177 (+)
AMCG00002152 NA other downstream 2967691 5218830 ~ 5226656 (+)
AMCG00002190 acot7 other downstream 4335515 6586654 ~ 6602608 (+)

Expression


Co-expression Network