G120763


Basic Information

Item Value
gene id G120763
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 3043640 ~ 3046804 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU151324
CCGTGTGGCAGCAacactgtttattttgatacagaATAACACAGTGATGGCGGGAATCCaaaaaggcaacaaaacaatacaaaaacaaacaaatatttatatatagaacaATTCAATTCTAAAGGCCTTTGTCGTTACACTAGCCCTTTTTAAACGGTTTGAAATTACACGATGGGGGTGCATTTGCAGCATGGGACACATCAGTGCCAGGTCTTTCACCGCAGGTCTGAGACACCAGACTTGAGCTCAGGTGTGACGAAGCAAACCGAGTGCCTTGAGTTTCTCAATATGccatcaaaatacaaaaaaaaaaaaaaaaggatttacaaTCTACAATAATCGCCATCATcgtaattaaacaaaaacatgtcaagGTTATTCTGATAACGCCACGATTCCTTagtgagcacacacacacgcgggGGAGGTCCAGAGCAACAGACAACATTGGCAACAGGAATTAGGGGCAAAGGCAAAAGCTGTCTTAATGGAAAGAGCATCACTTCCACTGTTGTGTTCTGTAGTGTTGGCTACAATACAAAGTCCATGTTTGCCACGGAGACCAATGACTTGTGTTCCTCTGCTGTAATCTCCGGGGCCGCCCCTGAAAAGGCAGAAATATCCCCTGCGCTGCTCGGCTGCTTCAGACAATCAAACCGCACCGCTGGGGTCCTGGCGTCATCGGGCAGCCAGTAACGCAGTGTATTCAACAGTCTTGGTGTCACGACTCCCGATATCAGCGTGGTTACTTGGTCAGCTCGGGGTTTGATTGGAATCCTTGAGTTGAAAGCTCTATAAAAGTGACGTTGCTGTAATGGGGGAAGTAACTGTAAAATCCATTTCACAACCCTGTTTACAGCCGCTAAATTTGCAGCAGATGCACCGAAACCTGTTACCTTTATCGCCAGTCTTGCAACACCCTTACCCTAATCTCTCGGGTGAAGTCCCCGGAGGACGTGGCGCTCTCTGTACAGTGAAGACATTTCGAAACACGGATACATTTACAatgtcacattaaaaataaaaacataaaaaagaatgacatttttaaaccaaACCGGTCCCAATCCTTATAAAACATGTTCTGAAGACATTTAACTTCCTGAATGTTGTAAAccataaaactaaattatacaaaaagtgTAAACCCATAATGGAAAGTCATTCATATATAAGTACCATAATATACTATCCAATACAACAATACTGTTCAGTGCCTACTGAGAAACTGCAATGGTGCAGTCAATAGGAAAGGAAGATTCGCTCACGTATGTACAGCGTGTGAATGTAGTGACCTACATAGATGTATAGCGTGTGAACTTGTAGTGCTtaggtgttttctttttgcaaggTACTCTGTATTAAAAGGCATTATAATTATTGACACAGGCATCATACTATGACTATGATAAGCATGTTCTTACTAAGTATTGTGAGGCATTGTTGCATTTACCAACAAGTGAGCAAGAGAGTGGATGTCCGTTTCTCTAGGAGAGAGTAAGGGGTCAGAGCACCCACTTGGACCGGGAGGCTGTGGAAACGCGTATTGTTCTGGAGCTGGGGGGTAACGTGGGCCTACCTCTTACAGACATCACACACAGAGGGATCCACGATCTTCACAGAAGTCTTTTGCACTTTCATATCCTTGGACAGGCTGCAAAGAACAGAGCatagaccccccaccccccacatccCCAACAGCATCGGAAGACTTTGGATgagtattttgtgtttctgaagtTCTCCCCCTaatggtctgtgtgtgttggggtcAAGAGTTTGAGCGCACAGTGGGCCAAGAGATGGGTTGGGTTGGTCACGACGCCGAGTAAACGAGGGTGACTGAACCATCACGCTGTTGTGTGGAGGGGCGTCTGTCAGACAATCAAGGCATCACAAAGGTCTCTCCTACCTTCCTGCACTCCACCTCTACAGACTGATAAAGTGTGTCCCTATACATCTTTGGATCACATGGATTTAAGGGTAGTGTTCTAGTAAAGTCCTGCTTTTACTAGCTTATTCaacttacaatatatttacatgaaaataaaacatgactcTGAAACTGACATTATAACAAAGGCCCTGAACTGACAGTCAGGTCCTGAGAAATGTCAGTATTTATATTCCTATATTCCTAGAGGAGTGCTTTAGCGTTTTAGTGGAGGGCCTACAGGTCCCTCTTCTGCTTTCTAAGTATCTGAGAGAGGTTGTTGTAAAACACGCTGGAGGAAAAACAGCCATGGAAGCGAATGTTTAAGTCAGTCCTAGATCCCAAATCTCAGGGCTGGCCAGTCTAGGGTTCACAAGGGGGATACAGCTAATTCTCCAACAACCAGCTTCCTGACACTTCTTTATCTTGGTGTAGATGTGCGTTTGATTTTGTTCGCTTCAGTCCAGTTCAGCGAGCCGGCAGTGCTGCTGCCAGTAGAAAGACCAGGggctggagggagggagggatgggatGAGGCCGGCGGAGGATCGTCACTGCTGCTTGCAGCTCTCCTTCTTGTCTTTGGTCTTGGGACGCCCAGCCTTGTCACTCTGCCGTTTAGTTGGGGGAATGAAGGTGGGCTCGCTGCGGTCCTCCAAGTAGTCAAAGAAACGAGGGGCAGGGCTGGGCTGGTAGTGCTGATGCGGACAGGGTGTGTCCGGATGCAGAGCTCTCCTGCCGTTTGCCTTTGAAGGTGGGATCCAGCTCCTCTGCTATGTTTCTGATGGGCGGCTGCTGCCTGCAGTGAGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151324 True 2744 lncRNA 0.46 2 3043640 3046804

Neighbor

gene id symbol gene type direction distance location
AMCG00002087 NA coding upstream 3617 3025064 ~ 3040023 (+)
AMCG00002088 ybx1,LOC100194660,LOC107733967 coding upstream 38922 2995378 ~ 3004718 (+)
AMCG00002082 NA coding upstream 56861 2967365 ~ 2986779 (+)
AMCG00002081 LOC106572212 coding upstream 91311 2947466 ~ 2952329 (+)
AMCG00002080 NA coding upstream 133105 2906865 ~ 2910535 (+)
AMCG00002086 NA coding downstream 38208 3085012 ~ 3087293 (+)
AMCG00002100 NA coding downstream 433040 3479844 ~ 3489633 (+)
AMCG00002101 klhl21 coding downstream 472511 3519315 ~ 3523845 (+)
AMCG00002099 NA coding downstream 514814 3561618 ~ 3562267 (+)
AMCG00002107 NA coding downstream 542563 3589367 ~ 3594982 (+)
G120755 NA non-coding upstream 1205 3040567 ~ 3042435 (+)
G120692 utp3,LOC102785935 non-coding upstream 177616 2861915 ~ 2866024 (+)
G120674 NA non-coding upstream 347233 2696064 ~ 2696407 (+)
G120602 NA non-coding upstream 817660 2225780 ~ 2225980 (+)
G120566 NA non-coding upstream 840269 2202617 ~ 2203371 (+)
G120774 NA non-coding downstream 44990 3091794 ~ 3092899 (+)
G120778 NA non-coding downstream 52803 3099607 ~ 3100142 (+)
G120779 NA non-coding downstream 53474 3100278 ~ 3101046 (+)
G120794 NA non-coding downstream 66646 3113450 ~ 3116424 (+)
G120823 NA non-coding downstream 444476 3491280 ~ 3494067 (+)
G120742 NA other upstream 84165 2956908 ~ 2959475 (+)
AMCG00002076 NA other upstream 189513 2852154 ~ 2854127 (+)
G120518 NA other upstream 1102824 1924022 ~ 1940816 (+)
AMCG00002019 NA other upstream 2050876 682670 ~ 992764 (+)
AMCG00002098 NA other downstream 487010 3533814 ~ 3542177 (+)
AMCG00002152 NA other downstream 2172026 5218830 ~ 5226656 (+)
AMCG00002190 acot7 other downstream 3539850 6586654 ~ 6602608 (+)
AMCG00002215 NA other downstream 4346996 7393800 ~ 7411230 (+)
AMCG00002245 NA other downstream 5691967 8738771 ~ 8792478 (+)

Expression


Co-expression Network