G120779


Basic Information

Item Value
gene id G120779
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 3100278 ~ 3101046 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU151340
atttttttggtttgcctGGATAAATATGCCCTCTGCCTGGACGGGCGACCCCGACACTGACCTGCAGGAAGAGCTTATAGATCTGCGCCTGGAGCTCTTTGATCTCCTCGTCCACGACCGTCGGCTCGGCTTTGCTCCGGGGTGCGAACACGTCCTCGTTTAGCGGCCCCCTGCAGGGACACGGGGCCACAATGTGTCAGATTAACCATCCCTTCATTCTTATAAACACAACTGGATTATTTTCAAAGGGGGTCAGACTCATTCAGAAGAGGAGTACGAGGAATCTGCACAGTTTTCACTGCAGGGGAATCCGAGGTGTTGAATATCTGCTTTGACTCACGCGCGGACTTTGTGTCTGCCGATGATGAAGGCCACTTTGCGGCTCCAGGGGTTGATGAAGCTGCACCAGCTGGTGTCCAGGGTCACGTAGTCCCCGTTCTGACAGCGGAACCGGACCGGAGAGTGGTCGAAGGGGGGCTGGCCCGCGTACTTCAGGACTAGACCGAGGGAGGGAGCAAGAGattgagtgagagagaaagagactaAGAGGgttgaaggagagagagacggacagagaaagagaaagagagagggtagagccctgcatttcagcccgagcCCGACGGGCACCGACTTATTTACACCCCTCAGGCCGGGCTTCGGGCCAATTTTCACATCCTAGTTCACATGCGGGCCGGGCatcgggcctgttttaggctcctcctcctttttatattttagacattaattaattaaaagaaactatgag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151340 True 769 lncRNA 0.54 1 3100278 3101046

Neighbor

gene id symbol gene type direction distance location
AMCG00002086 NA coding upstream 12985 3085012 ~ 3087293 (+)
AMCG00002087 NA coding upstream 60255 3025064 ~ 3040023 (+)
AMCG00002088 ybx1,LOC100194660,LOC107733967 coding upstream 95560 2995378 ~ 3004718 (+)
AMCG00002082 NA coding upstream 113499 2967365 ~ 2986779 (+)
AMCG00002081 LOC106572212 coding upstream 147949 2947466 ~ 2952329 (+)
AMCG00002100 NA coding downstream 378798 3479844 ~ 3489633 (+)
AMCG00002101 klhl21 coding downstream 418269 3519315 ~ 3523845 (+)
AMCG00002099 NA coding downstream 460572 3561618 ~ 3562267 (+)
AMCG00002107 NA coding downstream 488321 3589367 ~ 3594982 (+)
AMCG00002106 NA coding downstream 505839 3606885 ~ 3618192 (+)
G120778 NA non-coding upstream 136 3099607 ~ 3100142 (+)
G120774 NA non-coding upstream 7379 3091794 ~ 3092899 (+)
G120763 NA non-coding upstream 53474 3043640 ~ 3046804 (+)
G120755 NA non-coding upstream 57843 3040567 ~ 3042435 (+)
G120692 utp3,LOC102785935 non-coding upstream 234254 2861915 ~ 2866024 (+)
G120794 NA non-coding downstream 12404 3113450 ~ 3116424 (+)
G120823 NA non-coding downstream 390234 3491280 ~ 3494067 (+)
G120827 NA non-coding downstream 399291 3500337 ~ 3502927 (+)
G120928 NA non-coding downstream 687670 3788716 ~ 3791941 (+)
G120961 NA non-coding downstream 839410 3940456 ~ 3940716 (+)
G120742 NA other upstream 140803 2956908 ~ 2959475 (+)
AMCG00002076 NA other upstream 246151 2852154 ~ 2854127 (+)
G120518 NA other upstream 1159462 1924022 ~ 1940816 (+)
AMCG00002019 NA other upstream 2107514 682670 ~ 992764 (+)
AMCG00002098 NA other downstream 432768 3533814 ~ 3542177 (+)
AMCG00002152 NA other downstream 2117784 5218830 ~ 5226656 (+)
AMCG00002190 acot7 other downstream 3485608 6586654 ~ 6602608 (+)
AMCG00002215 NA other downstream 4292754 7393800 ~ 7411230 (+)
AMCG00002245 NA other downstream 5637725 8738771 ~ 8792478 (+)

Expression


Co-expression Network