AMCG00002203 (LOC106926566,LOC107691064)


Basic Information

Item Value
gene id AMCG00002203
gene name LOC106926566,LOC107691064
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 7120579 ~ 7128460 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002203
ATGTCAGGAGTAGGGAGGTCTATGAAAAAGGACTGTTTTGCCTCAGGGACCCTGTCATCGTCTTCTCTGAAGGGGACATTTAGTAAAATCCAGCAAAGGAGACCCAAACCAGGAAAGAAACCTTTACCAAGAGAAGAGGCCGAGAGCGACTGTGAGCTTTGTAGGAACCGGACAGTTCGTCGGATTCTGACGGCGTGCGTGATCTCGCTGCTGGCTCTCCTGGGTTCAGTATCCGTGGACCTCAGCAACAGCCTGCAGGTGTGGCGGGACTCCGAGGCGGCTCTCTCTGAACTCAGCTCTTGCAGGACGGACCTCGTCCTCGGACTCACCAGGGTGCTGCAGGGCGAGCGAAACTCATGCTGGTCAAGTAACACAACACTGCCTGTGACGTGTCAGCTGCCCTCCAACTATATAATACAGTGGATTGACCAGGTCTGTAAAACCATGGAGCTGCAGGCCAGTGGTCCTGCGCAGCCATGTGCTGAAGAGCAGAATGAACTCTGTGAAAGGCTTGTGGGAGCTATCGCTGAAGCCCTCAATGCGTCCTGGGAAAAAAAGGACTTAGAAATTAATGACACAATGGCAACATTTTCCTTGGCCATTTTAAAGCTCCTGGAAGTGTGGGGGAACCCAGAGTTGGATCTGAGAAAGGCGAGGCTCCATTCTGATTGGGCAGATGTGCTGTCACTCAAGCTCCTTATGGGGTTCCAAGAGGTCACCCACTACTTACATGGTGCATTGTCCCCCCTGTCCACTCAGACCTGGCCCGAGGCCGTGCATGGGCTGAACTTGGCCATGCTGCTGTCTGAGAACCTGCAGAGTTGCTGGCTGGAGAATGGTAACCTTTCCCAGCACTTGACTGAACTTGGAAACACATCCCTTCACTACCTTTCATGGACCTTCCTGGATCTGAGTTCTGCCGAAACCACGGATGATGTCATTTCTGGGCTGAGTGAGGTGCAGGCCTGTCTGGTTGACAGGGCCCGGCAGAATCTGAAGAGGAAATCTCGAGACTTCCTCTCCACTGTGAGCCTCAAGATATGCCTGTTGACCATTGCCTGCCTTATCTATCCCATCGTGCTGCTGTCCTTCAAACAGATGACCGAATGGATACAGAACTACGCGAGGAGCCTAAAGGAGAGAACAGAAGACCTCAAGCGGGAGAGGCGCCTGGCAGAGGACCTCTTACACCAGATGTTACCCAAATTTGTGGCTAAGCAGCTGCGTCAGCAAAAGCACGTGGAAGCCGAGAGCTACGAGAATGTAACAATTTTCTTCTCGGATATCGTGGGTTTCACGGCTATCTCGGCCTCCTGCACCCCCTTGCAGGTTGTGGAGATGCTAAACCacctgtatgtgtgttttgacaCTCGCATTGACTCCTACGATGTCTATAAGGTGGAGACTATAGGAGACGCCTACATGGTCGTGAGCGGCCTGCCAGAGAGGAATGGGGACAAGCACGCCGATGAAATTGCCAAAATGTCCCTGGATCTGGTGGCTGCTGTGCGGCAGGTGCCCATTCCCCACATGCCCACCAAACGGCTGCAGCTCAGATCTGGCATCCACACCGGCCCCTGTGTTGCTGGGATTGTGGGTTACAAGATGCCGCGGTACTGCCTGTTCGGAGACACAGTCAACACAGCCTCTCGCATGGAATCCACCAGCCTGCCTCAGAAGGTGCATGTGAGCTCTGCCACCTACATCGCCCTGATGAAGGACGACGCTTATGAGCTGCAGCTCAGAGGGGAGATTGAAGTCAAGGGAAAAGGTAAAATGAACACCTACTGGCTGATTGGACACAAGAATTACAGCGTCCAGAACGACAGCCTGGTCTGCCACTGGAAACCCGGTCTGTCgaggaagaagaaaatgggAAATGGGAGCAACACTTCTGGCGAACAGTCCAATACCAGCACTGCGTTCCAGAGCACCAGTGAGAACAACACCCCCGTCTCCCTGCAGGAGCGCGGCAGCAGTGCCCAGCGTCCAGGGCCAGACAGCCCGCTGCGCGTGTCTGCACTGGTGGAGCAGCCCTCCGGTGCGATGGGCACACTGGGCTCAATGATCGGGGGGTTGCCGGGCTGCAGCAGCGAGGACAATCCCCAAGGGTGTACCCGAAATGGGATGGCCGTGCCCAGTCCTGGGGAGAAGAGCGACCTGCTGCCTGGATCCGTCCTCCAAGGATAG

Function

NR:

description
PREDICTED: atrial natriuretic peptide receptor 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002203 True 2190 mRNA 0.55 8 7120579 7128460

Neighbor

gene id symbol gene type direction distance location
AMCG00002202 LOC107595762,LOC107602448,LOC107735586 coding upstream 1393 7110777 ~ 7119186 (+)
AMCG00002195 wrap73,LOC107748967,LOC107595759 coding upstream 334605 6773923 ~ 6785974 (+)
AMCG00002194 NA coding upstream 394778 6714107 ~ 6725801 (+)
AMCG00002192 gpr153 coding upstream 464692 6635934 ~ 6655887 (+)
AMCG00002189 acot7,LOC107754737,LOC107693425 coding upstream 567105 6537081 ~ 6553474 (+)
AMCG00002204 NA coding downstream 17265 7145725 ~ 7150413 (+)
AMCG00002207 NA coding downstream 24013 7152473 ~ 7153321 (+)
AMCG00002205 NA coding downstream 28027 7156487 ~ 7157849 (+)
AMCG00002206 NA coding downstream 31172 7159632 ~ 7166827 (+)
AMCG00002211 mthfr coding downstream 49979 7178439 ~ 7191115 (+)
G121526 NA non-coding upstream 322536 6792976 ~ 6798043 (+)
G121417 NA non-coding upstream 793098 6327197 ~ 6327481 (+)
G121402 NA non-coding upstream 842679 6277518 ~ 6277900 (+)
G121228 NA non-coding upstream 1550332 5474136 ~ 5570247 (+)
G121198 NA non-coding upstream 1844656 5243709 ~ 5275923 (+)
G121680 NA non-coding downstream 432606 7561066 ~ 7562732 (+)
G121688 ski,LOC106572818 non-coding downstream 518258 7646718 ~ 7648316 (+)
G121722 NA non-coding downstream 701347 7829807 ~ 7834211 (+)
G121741 NA non-coding downstream 782098 7910558 ~ 7917243 (+)
G121767 NA non-coding downstream 816905 7945365 ~ 7953624 (+)
AMCG00002190 acot7 other upstream 517971 6586654 ~ 6602608 (+)
AMCG00002152 NA other upstream 1893923 5218830 ~ 5226656 (+)
AMCG00002098 NA other upstream 3578402 3533814 ~ 3542177 (+)
G120742 NA other upstream 4161104 2956908 ~ 2959475 (+)
AMCG00002076 NA other upstream 4266452 2852154 ~ 2854127 (+)
AMCG00002215 NA other downstream 265340 7393800 ~ 7411230 (+)
AMCG00002245 NA other downstream 1610311 8738771 ~ 8792478 (+)
AMCG00002272 NA other downstream 2715745 9844205 ~ 9851312 (+)
AMCG00002294 rere other downstream 3439452 10567912 ~ 10604839 (+)
AMCG00002296 NA other downstream 3586339 10714799 ~ 10753893 (+)

Expression


Co-expression Network