AMCG00002240 (calml6)


Basic Information

Item Value
gene id AMCG00002240
gene name calml6
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 8810319 ~ 8813591 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002240
ATGTTGAAGTTAGGACTTGCATTCTTACTTGGGGTGCAACTCAGTCAGTCTCAGAGCACCGTCGCCCGCAGTCACTCCTGCCTCTGCCACAATGACCCGGGTCCCTGCTCTCAATGCCCCAGCGTCCCTGTTCTTTTGCAGGCCGACACCCTGACTCCCGAGCAGGTCACCGAATACAAAGGTGTGTTTGAGATGTTCGACGAGGAGGGGAACGGAGAAGTCAAGACATCGGAGCTTGAGAAACTCATGAGCCTGATGAGCATCAACCTCACCAAGAGAGAACTGGTCCAGATGGCCAAGGATGTGGACAAGGATGGTAAAGGAGTCTTTAACTGCGACAGTTTCCTGGGCCTGATGGTACTTTATCATGAGAAGGCCAAGAACCAAGACGCTGAGCTCCGCGCCGCCTTCAAGGTTTTTGACAAGGAGTCCAAGGGCTACATCGACTGGGAGTCCCTCAAGTACGTGATGATGAACGCGGGAGAACCCCTCAACGCGGAGGAGGCCGAGCAGATGATGAAGGAAGCCGACAAAGACGGAGACGGAACCATTGATTAtgaaggtaaaataaaacacatccaATCGGACCTGATTGCCTGTCACACAAAAATCCCTCCACAGTGTCACAACAGAATTCGTGGCCATGATGACCGGAGACTCTTTCAAGATGACCTAATATCGAGACAGAAGGGCGAGTGA

Function

symbol description
calml6 Predicted to enable calcium ion binding activity and enzyme regulator activity. Predicted to be involved in regulation of catalytic activity. Predicted to be located in cytoplasm and nucleus.

NR:

description
PREDICTED: calmodulin-like protein 6

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
K02183 CALM; calmodulin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002240 True 699 mRNA 0.52 5 8810319 8813591

Neighbor

gene id symbol gene type direction distance location
AMCG00002239 gabrd,LOC107690714,LOC107711789,LOC107684467 coding downstream 90202 8712465 ~ 8720117 (-)
AMCG00002238 NA coding downstream 101382 8706529 ~ 8708937 (-)
AMCG00002237 ajap1 coding downstream 287489 8496082 ~ 8522830 (-)
AMCG00002234 NA coding downstream 783295 8022677 ~ 8027024 (-)
AMCG00002233 NA coding downstream 796101 8012977 ~ 8014218 (-)
AMCG00002247 NA coding upstream 85034 8898625 ~ 8903588 (-)
AMCG00002249 mmp23b,LOC106572002 coding upstream 120378 8933969 ~ 8946187 (-)
AMCG00002251 mib2 coding upstream 143519 8957110 ~ 8982144 (-)
AMCG00002252 mib2 coding upstream 182111 8995702 ~ 9005887 (-)
AMCG00002248 ubiad1 coding upstream 205016 9018607 ~ 9022271 (-)
G121789 NA non-coding downstream 793244 8016064 ~ 8017075 (-)
G121754 NA non-coding downstream 965003 7830193 ~ 7845316 (-)
G121718 NA non-coding downstream 1146642 7662986 ~ 7663677 (-)
G121716 NA non-coding downstream 1151468 7657832 ~ 7658851 (-)
G121689 NA non-coding downstream 1247572 7561077 ~ 7562747 (-)
G121875 NA non-coding upstream 11840 8825431 ~ 8859003 (-)
G121885 NA non-coding upstream 55054 8868645 ~ 8870698 (-)
G121912 NA non-coding upstream 118572 8932163 ~ 8933163 (-)
G121935 NA non-coding upstream 204535 9018126 ~ 9018327 (-)
G122019 NA non-coding upstream 324856 9138447 ~ 9213429 (-)
AMCG00002223 NA other downstream 970908 7826641 ~ 7839411 (-)
AMCG00002167 NA other downstream 2794926 5975725 ~ 6015393 (-)
G120993 NA other downstream 4590442 4214715 ~ 4219877 (-)
G120927 slc45a1,LOC107756616,LOC106565711,LOC107702000 other downstream 5023775 3784236 ~ 3786544 (-)
G120907 NA other downstream 5094067 3713867 ~ 3716252 (-)
AMCG00002265 NA other upstream 795159 9608750 ~ 9620127 (-)
AMCG00002275 ube4b,LOC107681967,LOC107570768 other upstream 943834 9757425 ~ 9801108 (-)
AMCG00002276 NA other upstream 1016928 9830519 ~ 9833224 (-)
AMCG00002279 NA other upstream 1023327 9836918 ~ 9853075 (-)
AMCG00002288 NA other upstream 1456298 10269889 ~ 10279984 (-)

Expression


Co-expression Network