AMCG00002359


Basic Information

Item Value
gene id AMCG00002359
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 11913110 ~ 11918100 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002359
ATGCCCAGAGCGGGCAAGACCAGAAACTCAGGTTCGGCGTCCGCTCCGCAACAGTATCGGAAGAGGACTCGAAACATGGGCCAGTCTCAGGGAACAGCCTCGGACGACAACGGAGCAGTGCCATGGGggtctctccctgtgtctctgcaggaggAGGTGTTGCTGCGTGTCCCCGCACAGGACGTTGTTTTATCGTGCAGCCGCGTGTGCAAGCTGTGGTGGCAGCTGGCAGACAGCACCTCCCTGTGGAAAAGGAGGTGCGCACAGGAGGGCCTGCGACCTTACAAGTTCAATGGCTGGCATCTTCAGCATAATGGTGGGGATAAGTGGAATATTGAAGATGTATCTCCTCATCATGCCCTCCCTGACCTCTCAGTGCAGAAATTCTTTGTCACGTCCTACGGGTATGCTCCACGCTGGGACTGCGGCTGCCAGTATGAGATCTGTGTGCAGCTGCTGTCCCACAGGAAGAAGAAATACGGACGGGGCGTGCGCTTCGTGCGGTTCTGTCACGGGGGGAAGGACACTCAGTTCTGGGCCGGCTGGTATGGCATCCGGtGCCTCAATTATAGCCATACCCACACTGCCCCCCAGTCTCTCAGCTCCAGTGTGCAGGGCTGTGCCCAGAGAGCTGTGGCTCTGTTATTGTCACAAGCAGCTTCAGAGAATGGGAAGCTGTTTCCTGATGGAGATACGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002359 True 699 mRNA 0.57 6 11913110 11918100

Neighbor

gene id symbol gene type direction distance location
AMCG00002358 NA coding downstream 95 11905910 ~ 11913015 (-)
AMCG00002357 capzb,LOC106583096,LOC106565651,LOC105897928 coding downstream 20411 11882073 ~ 11892699 (-)
AMCG00002345 NA coding downstream 43758 11864614 ~ 11869352 (-)
AMCG00002349 NA coding downstream 79287 11830472 ~ 11833823 (-)
AMCG00002347 NA coding downstream 91679 11815327 ~ 11821431 (-)
AMCG00002367 NA coding upstream 137541 12055641 ~ 12060552 (-)
AMCG00002373 LOC101076725,LOC106573767,LOC106598349,LOC106598644,LOC106597130 coding upstream 164011 12082111 ~ 12096642 (-)
AMCG00002377 NA coding upstream 181224 12099324 ~ 12100920 (-)
AMCG00002375 NA coding upstream 206098 12124198 ~ 12139756 (-)
AMCG00002376 NA coding upstream 221905 12140005 ~ 12142344 (-)
G122621 NA non-coding downstream 49054 11862903 ~ 11864056 (-)
G122636 NA non-coding downstream 53785 11857391 ~ 11859325 (-)
G122633 NA non-coding downstream 64918 11847081 ~ 11848192 (-)
G122632 NA non-coding downstream 67439 11844392 ~ 11845671 (-)
G122551 NA non-coding downstream 194141 11718530 ~ 11718969 (-)
G122726 NA non-coding upstream 125215 12043315 ~ 12045019 (-)
G122801 NA non-coding upstream 277820 12195920 ~ 12243914 (-)
G122858 NA non-coding upstream 1082741 13000841 ~ 13005335 (-)
G122869 NA non-coding upstream 1133926 13052026 ~ 13052390 (-)
G122877 NA non-coding upstream 1149121 13067221 ~ 13067627 (-)
AMCG00002351 NA other downstream 40248 11869607 ~ 11872862 (-)
AMCG00002350 tmem240a,tmem240,LOC107687438,LOC108275582,LOC105898995,LOC107593924,LOC107673083 other downstream 58219 11848470 ~ 11854891 (-)
G122597 NA other downstream 178786 11731617 ~ 11734324 (-)
AMCG00002327 spen,LOC108414948,LOC106565133,LOC107591084,LOC107737540 other downstream 228021 11647911 ~ 11685089 (-)
AMCG00002317 plekhm2 other downstream 385192 11514000 ~ 11527918 (-)
AMCG00002368 rbm24b,rbm24,rbm24a,LOC106596654,LOC107601977,LOC106517771,LOC105905339 other upstream 77728 11995828 ~ 12006352 (-)
G122862 NA other upstream 1110097 13028197 ~ 13029406 (-)
AMCG00002421 sec61b,LOC102796100 other upstream 1731127 13649227 ~ 13654247 (-)
G123263 NA other upstream 3023160 14941260 ~ 14946311 (-)
G123585 NA other upstream 4918056 16836156 ~ 16839722 (-)

Expression


Co-expression Network