AMCG00002865 (ide)


Basic Information

Item Value
gene id AMCG00002865
gene name ide
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 4879277 ~ 4906202 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002865
CCGGAGTATGCAGCAATGTGTTAGCCGACCGGCCCAGTTTATAAAGTACCTACCGATCTTCAGacattattcacattttcagcCAGCTTTGGGCCCCCACACAGCGCTGAGTTACAGAATGAGTGACCCAGCAGTTCAGCGGATGGTGAGTGACATCATCCGGTCCCCAGAAGACAAGCGCGTGTACCGAGGCCTGGAGTTCACCAATGGCATCAAGGCCATCCTCATCAGCGACCCGACCACAGACAAGTCTTCCGCTGCGCTGGATGTTCATATAGGTTCGTTGTCCGACCCTCCAAACATCTCTGGTCTGGCCCATTTCTGTGAGCACATGCTGTTTCTTGGCACGGAGAAGTACCCCAAGGAGAACGAGTACAGCCAGTTCCTGAGCGAGCACGCGGGCAGCTCCAACGCCTTCACCAGCGGAGAGCACACCAACTACTACTTCGATGTGTCCCACGAACACCTCCAGGGGGCGCTGGACCGAGAGGTGAACTCGGTGGACTCGGAGCACGAGAAGAACCTGATGAACGACGCCTGGAGGTTGTTTCAGCTGGAGAAGGCTACGGGCAACCCAGATCACCCCTTCAGTAAATTTGGAACAGGTAATAAATTGACCCTGGAAACCCGGCCGTCTAAAGATGGAATCGATGTTCGCCAGGAGCTGCTCAAGTTCCACTCCACGTTCTACTCCTCCAACCTCATGGCCCTGTGTGTGCTTGGCAGAGAATCCCTGGATGAGCTGACCAATATGGTAGTGAAGCTTTTTGCAGAAGTGGAGAATAAAAGCGTCCCCATCCCTGAATTTCCAGAGCACCCTTTCCAAGAGGAGCACCTCAGACAATTTTATAAGGTGGTACCGGTTAAGGATATTCGAAACCTGTACGTCACCTTTCCCATCCCAGACCTTCAGAAATATTACAAGTCCAACCCTGGGCATTATCTTGGTCACCTCATCGGACATGAAGGCCCCGGGAGCCTGCTCTCAGAGCTCAAATCTAAAGGCTGGGTAAACACACTTGTAGGAGGCCAGAAGGAAGGGGCAAAAGGATTCATGTTCTTCATCATCAATGTGGATCTGACCGAAGAAGGGCTTTTACATGTGGAAGACATCATCTTCCACATGTTCCAGTACATCCAGAAGTTGCGCACGGAGGGTCCCCAGGAGTGGGTTTTCCAGGAGTGCAAGGATTTGAATACTGTTGCCTTCAGGTTCAAGGATAAGGAGAGACCCAGAGGATACACCTCTAAAGTCGCTGGTTTATTACATTATTACCCCCTAGAGGAGGTTCTGGCAGCGGAGTACCTGCTGGAGGACTTCAGACCAGACCTGATCGAGATGGTGCTGGACAAACTTAGACCCGAGAATGTGAGAGTGGCAGTCGTTTCTAAATCATTTGAAGGCCTAACCGATAAGACAGAAGAATGGTATGGGACACAGTATAAGCAGGAAGCAATTTCTGAAGAGGTTATAAAGAAGTGGCAAAATGCTGACCTAAATGGAAAGTTTAAACTGCCCACGAAAAATGAATTTATCCCAACAAATTTTGAGATCTACCCCCTGGAAAAAGATGCACCACCGTACCCAACACTGATAAAGGACACCGCAATGAGTAAAGTGTGGTTCAAACAGGATGACAAATTTTTCCTTCCAAAAGCTTGCCTCAACTTTGAGTTTTTCAGCCCATTTGCTTATGTGGATCCATTGCATTGTAACATGGCCTATTTGTACCTTGAGCTGCTCAAAGATTCTCTCAACGAGTATGCATATGCAGCTGAGTTAGCTGGCTTGAACTATGACCTGCAAAATACCATCTATGGGATGTATCTGTCTGTGAAGGGCTACAACGACAAACAGCACATCCTGCTGAAGAAGATCGTAGAGAAGATGGCCGCCTTCGACATCGACGAAAGGCGGTTTGAGATCATAAAGGAAGCGTATATGCGATCTTTGAATAACTTCCGCGCGGAGCAGCCCCACCAGCATGCCATGTACTACCTGCGACTGTTGATGACGGAGGTGGCCTGGACCAAAGACGAGCTGAAGGAGGCCCTGGATGATGTCACTCTCCCCCGCCTCAAGGCCTTCATACCTCAGCTGCTGTCACGGTTACACATTGAAGCACTTCTCCATGGCAATATCACGAAACAGTCTGCTTTAGGGATGATGCAGATGCTGGAGGACACGCTCATCGAGCACGCTCACACCAAGCCCCTCCTCCCCAGCCAGCTGATTCGCTACAGAGAGGTCCAGGTCCCTGACCGGGGATGGTACGTGTACCAGCAGAGGAATGAGGTGCACAACAACTGCGGCATCGAGATCTACTACCAGACCGACATGCAGAACACCCACGAGAACATGCTGCTGGAGCTCTTCTGCCAGATCATCTCGGAGCCTTGCTTCAACACCCTGCGCACCAAGGAGCAGCTGGGGTACATCGTGTTCAGCGGGCCGCGCAGAGCTAACGGCGTCCAAGGCCTGCGCTTCATCATCCAGTCGGAGAAGGCGCCGCACTACCTGGAGAGCCGCGTGGAGGCCTTCCTGAGGACCATGGAGCGCAGCGTGGAGGAGATGGCTGACGAGGCCTTCAACAAGCACATCCAGGCGCTGGCCATCCGCCGCCTGGACAAGCCCAAGAAGCTGGCGGCCGAGTGCGCCAAGTACTGGGGGGAGATCATCTCGCAGCAGTACAACTTCGACAGAGataATATTGAAGTCGCCTATCTCAAGACGTTGACTAAAGAAAATGTCATGCAGTTTTATAGGgatCTGCTCGCGGTTGACGCTCCCAAGAGGCACAAGGTGTCCGTGCACGTGCTGTCGAGGGAGATGGATTCCTGCCCGGTTGTTGGTGAATTTCCGTGCCAAAATGATGTCAATCTGGCCCCTGCACCCTCCCTGCCTCAGCCCGTCCTGGTGCAGGACATGACGGAGTTCAAGCGCAGCCTGCCCCTCTTCCCCCTGGCCAAACAACACATCAACTTCATGGCGGCGAAGCTGTGAGCGGCCCCCGCCGACGCTGGAGCTATAATAATgaatctctgtgtgtgtgagcgtgtgcgtgtgtgcggaGACTGTGTACACGTGTGAGTTGCAACTAGTTGTGTTCATTATCAAAGCTCTCTGGAGACATAGAAGTCACaccacattttctttcttttttatgttaaaaataaaatatacaatacatagaatgttaatagattaaaaaaaactaaatgacaaGAGCCTGAAAAAGAGTACCAATATTGATTCATCAGTTTAAAACGCCTGTCCTATGAAAAGCTGCTTTGGAAAGTAATAATAGTGGTATTGCGAGGTTTAGCACAGTGGGCAGAGctggtgttttatttcagtgcagtgGGACGTGTCCGATGATTGGTCTTGCATTCGTAGTAATAACTTTGGGGGGACGCACAGTAACGGCAAAAGCGTCACTCCAAGCCACTTTATTTCATGAAGTCCTGCAACACACTAATGTAGAAAGAAATGTCTTTATCAATAGAACATCAGccttatatacaaatatattcttGAGTTTTAATCTTTGTACAAGTTTTCGGGAATTTGacgatttttatttaaactagtAAAATGTTGGGACCATTTGAGCAGCTCGGCTTGAACTGCCGATCACGTGAGGGGCGGAGGGAGCGAGCCGTACCTTGGACTCATCCGCTTTGCTTTTTAACTAATGctttttacagttttgtatCGTTGAAGCATCTTCTCAGGGCTGTTCTAATTTGGCTTCAATGTTGTTTgaaaaaacgaaaaataaaCAACCTTTTAATTTAAGCCACCTTGAATTGTTCCGCACTTCATTCAGCCGGGTTTCGAGAATCGTTTCCGGAAACGGCCCGTACACGATCGCGAAGAGAGAGCGGCGCACGTTTCAAAACATGGATCGGAGTGAGATTATGACTAGGGTTATGGCAAGAGATGGGTTAGGGTAGTGGACATGGTGGTGAAGACCCTGCAGGCTGCCAGAGATGTCCACTGTCCACTCCATAGGGTGGTCTCTGGTCTCCTCCTCCTACCTGATTAATTTTCaatataataaagtaattaaaccGGTTCTAATGCTGTGGGGTAGAGCTGTAACACATGGGATGCAAACACTTCACCAGGAGACCACCGAGGTTTGAACTCCTGGAGTATTTAGTTGAGCCACACGTTCTATTATAAATGGCTGCCACACAACATCAGAAACTGCTCGGATGACCTGAATAGATCAACAGCTACAGTAACTTCACGCGCGACTCTTATTTGACTTCTAAAAGACTGTACGGAGTGCTGATATTGTGCTTGTAAATATGCCCTCACATTTAAGCAATAAAGATCAAATAAGTGTACATAAACTCTAGCAAAGGGCGATTTGAAGCTAAATTCAGTCAAAACTGAGGTGATTTTGcacttaaattattttaggCTACGATCACAGAGTTCTCCGGAAGGAACCTTCACCGGCGTCTGATCTTTCTCGGGCCGAGTAAGTACCCGTCTCGTCCGATTATGTCCGGCCGCAGAAGGAGAATttccatttcttatttttaaccGCTTTAACTTGCCCTCACAGGTGTCACGACTGCTCAATTATCTTTTCCCATCAACCCGGCACGACCTCGCACAGTCTCCATTTCTCAGGGCTCGCTGAACATTTTAAAGCCAAATTACGACCGagaatcatattttttattagaagACATGCTTGGAATCTCCTGTACGATGTCTCAGGCTGGCTAGTATCAACTGTTATGCTGCATTTTCTACAATTCTTGAGAAAGCAAAACTCgtcacaatttgtatttttaaaaccatataatgcattaacaaattaaaataaattgaacagaAGTGTCATTAGTTACCGGTTGTTTAAAACGGTACAAAAAGCTTCTTAATGTTGTTCCAGCATTTTACTATGTTTAGCAACTTTGAAGTAGAAACTCAGGCATATCAATGGATTCTTACTGGAATCCGCTGGTGCACCATCCAAGTAGTAACACTGTACAGAAAGTCATTTGTAATCTGTTATTCACACCCAGTTGCTTGTGAATAGAAACCTGAATTTTATGTTAAGAATCCATTGTttacactgatttaaaaattatgcttcttgggggggggaggggtggcttGTGGTTTAAGAACAGCCAGAATGAAAGTGTGCAaagatttgtttccttttttaacttatttttttgcagtttacaataaatacagtatgtaaTTACCTCATTCTGCTGCCTGTTGTAATTCTACGCCCAGATCGAGACGACGTTTACCTGCAAACACCAGAGTCTTCAGTTCCTTTGTATCGGCAGGCTTTTAAGCACCGAATAAGTAAAGTGATGTGCATTACTACCTTGGTTAACGAGTCCTCTGTGAATGAAGCATGCAGACGTTCTGGGTTTGTTCGGGGGGGGGGAACGTGCCGAGTAAATCCACGTCTTCGGAATCGATGCGCATTGTTGGGTCAGAAGGGCGCGTTTTTATGCGCTGCAGACTCCTTGGTGAGTCAGAAGGGCATCAACCGGTGAGGGGAGTGAAGGGTGTGTTTTACAGGCACCGGTGACTGTCGATGCATCTCTGACTCACCGGAGGATTTCGAGCGGTGAATAAAACCACACGCCCTACGTTTGACAGCGAAGCGATGTCTTGGAATGAATCCGGTTCGTTAAC

Function

symbol description
ide Predicted to enable metal ion binding activity and metallopeptidase activity. Acts upstream of or within pancreas regeneration and type B pancreatic cell development. Predicted to be active in mitochondrion and peroxisomal matrix. Is expressed in myotome. Human ortholog(s) of this gene implicated in Alzheimer's disease and type 2 diabetes mellitus. Orthologous to human IDE (insulin degrading enzyme).

NR:

description
insulin-degrading enzyme isoform X1

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0046872 metal ion binding molecular_function
GO:0004222 metalloendopeptidase activity molecular_function

KEGG:

id description
K01408 IDE, ide; insulysin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002865 True 5686 mRNA 0.47 25 4879277 4906202

Neighbor

gene id symbol gene type direction distance location
AMCG00002860 NA coding downstream 31557 4837720 ~ 4847720 (-)
AMCG00002859 cpeb3,LOC106604870 coding downstream 53246 4798587 ~ 4826031 (-)
AMCG00002856 NA coding downstream 124359 4750605 ~ 4754918 (-)
AMCG00002855 NA coding downstream 129009 4746747 ~ 4750268 (-)
AMCG00002854 NA coding downstream 164971 4678707 ~ 4714306 (-)
AMCG00002869 NA coding upstream 147930 5054132 ~ 5060548 (-)
AMCG00002870 reep3 coding upstream 162243 5068445 ~ 5090402 (-)
AMCG00002874 NA coding upstream 283918 5190120 ~ 5196693 (-)
AMCG00002873 NA coding upstream 334558 5240760 ~ 5241506 (-)
AMCG00002875 NA coding upstream 356548 5262750 ~ 5276075 (-)
G139039 NA non-coding downstream 295105 4583865 ~ 4584172 (-)
G139029 NA non-coding downstream 367970 4507504 ~ 4511307 (-)
G139028 NA non-coding downstream 382915 4496162 ~ 4496362 (-)
G139027 LOC106576780,LOC103360772 non-coding downstream 383859 4495028 ~ 4495418 (-)
G139026 NA non-coding downstream 402614 4476464 ~ 4476663 (-)
G139249 NA non-coding upstream 490137 5396339 ~ 5396559 (-)
G139496 NA non-coding upstream 1251541 6157743 ~ 6158763 (-)
G139593 LOC100846954,LOC107575789 non-coding upstream 1576065 6482267 ~ 6510125 (-)
G139639 NA non-coding upstream 2095463 7001665 ~ 7073536 (-)
G139668 NA non-coding upstream 2312667 7218869 ~ 7219192 (-)
G138932 NA other downstream 876473 4001650 ~ 4002804 (-)
AMCG00002828 NA other downstream 925953 3928761 ~ 3953324 (-)
G138741 NA other downstream 2159858 2718208 ~ 2719419 (-)
AMCG00002752 p4ha1,LOC107753313,LOC106578992 other downstream 3953879 920788 ~ 925398 (-)
AMCG00002743 psap other downstream 4057686 805760 ~ 821591 (-)
AMCG00002935 LOC106589936 other upstream 2156271 7062473 ~ 7066350 (-)
AMCG00002945 NA other upstream 2442609 7348811 ~ 7352821 (-)
AMCG00002970 cj104,anapc16 other upstream 3024964 7931166 ~ 7938241 (-)
G139933 LOC108443181 other upstream 3579159 8485361 ~ 8494596 (-)
G140006 NA other upstream 3940830 8847032 ~ 8847840 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_006200 ide coding NC_007124.7 CM002897.2 42309688 ~ 42350160 (+)