AMCG00003392


Basic Information

Item Value
gene id AMCG00003392
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 594275 ~ 597178 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003392
ATGGGGGTACGTGTTTCTCGGGTTTTAAGAAACTTTAATCTGGAAAACCGTGCTCATCGGGAGATTGGAAAAGCTAAACCATCAGCTGCCCCTCGACATCCCTCGATGAAGAACATCGTAGAACAAAATCCAAAAAACACTGAAGCTATCCATAGGAAAAATGAGCCCCTTTTGTCATTACTAAAGACCGTGTATGTGGACTCGAAAGACCCTCCTCAGCAGAGTGTGAAGCATGAGGTAATGCCAAATGAAGAGGAACGTAGGCCTCTAAAATCCAGTCTACCAGGACCATACAGAATTTGTGATATTAAGGATGTCCCTCAAGGAAAACTGTCCATTGTGGAAGCCCTCACTGTCCTTAATAATTACAAACAGTCCCCTAAAACATGGACACCTGACAAGATAGCCCAAGAGTACTCTTTAGATTTAAAAGACACTGAAGCCCTTCTTGAGTTCTTCATCCCCTTTGAGGTGAAAATTATACCACCAAAGACTGAagacaagaaacaaataaagggAACCTAATGTTTGctctcttaattattttctatctTTGATGGATTTTATTTGGTGGCCTCTGTGAAGGCAGGTTAGAAGTTATCCCTTTTCTTGTTGCATGATTTTTAGATTAACAGAATCTGACACTTAAACACCCACAtgacataatacaaatataaacttgTTGTGTAATGAATCTGATATAGTTCTCATTTGCGAAGCTATGATAAGCCTTGAAAAAGACATTCTAAACATTTTGTACTGTTCATGTTACATATTTATGTGTTGAGTGACAGtcctttatgttttatattgattacTAATGGTGCATTTGTTTTATCATCCATTACAGTACACcccagttttattatttttcagaatatgGTAGCTCTTACAAATGCACTTCCTTTTCAGTGTCATAGATATTGTTTGGATATATTACTGTAAGGTGTTTTTGAAGGTGCATTTGATGAATTCAGcactaatgtaaaataaactgttgacttcatttattaattgaaa

Function

GO: NA

KEGG:

id description
K18161 NDUFAF4; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003392 True 1020 mRNA 0.37 3 594275 597178

Neighbor

gene id symbol gene type direction distance location
AMCG00003391 gpr63,LOC106571327,LOC106607724 coding downstream 54534 538794 ~ 539741 (-)
AMCG00003390 NA coding downstream 353762 232621 ~ 240513 (-)
AMCG00003389 LOC108441044 coding downstream 516767 62457 ~ 77508 (-)
AMCG00003393 NA coding upstream 22388 619566 ~ 627690 (-)
AMCG00003394 NA coding upstream 63350 660528 ~ 664276 (-)
AMCG00003399 NA coding upstream 74183 671361 ~ 802713 (-)
AMCG00003401 NA coding upstream 322134 919312 ~ 930578 (-)
AMCG00003402 NA coding upstream 470861 1068039 ~ 1216767 (-)
G103 NA non-coding downstream 35541 519101 ~ 558734 (-)
G89 NA non-coding downstream 108375 485584 ~ 485900 (-)
G112 NA non-coding upstream 17013 614191 ~ 616320 (-)
G122 NA non-coding upstream 137588 734766 ~ 769986 (-)
G188 NA non-coding upstream 436482 1033660 ~ 1035682 (-)
G212 NA non-coding upstream 545060 1142238 ~ 1158563 (-)
G257 NA non-coding upstream 990639 1587817 ~ 1588261 (-)
AMCG00003400 abracl,LOC107727609,LOC107558932,LOC107553474 other upstream 348045 945223 ~ 957196 (-)
AMCG00003423 NA other upstream 1800464 2397642 ~ 2401895 (-)
AMCG00003422 NA other upstream 1830219 2427397 ~ 2438821 (-)
G531 adck3,coq8a,LOC107602173,LOC107675039,LOC107727627 other upstream 2797479 3394657 ~ 3430272 (-)
AMCG00003444 NA other upstream 2938994 3536172 ~ 3538967 (-)

Expression


Co-expression Network