G103


Basic Information

Item Value
gene id G103
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 519101 ~ 558734 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU125
ACGACAATGAATTTTACATAATTCataggggacaaaactgagccaggaaattacagaccaatcagtctcacctgcatcacctgtaaaatgttggaaaaaatgattagacagaaaatagaggagcatctgaatgaaaaccatattcttggagatagtcaacatttagacgaggcagatcatgtattactaatttattaaacatttttgaacatgcaactgcagctgtagatcacgtgaaagcatatgatatgatatacttagatttccaaaaagcttttgataaggttccacaccaaagactgatcctcaaattggaagctgtaggcattcagggtaATGGGTAGGGTTATTgcatgtaagtagatggattatgaactggttgatgtataggaagtagagggtgtcgattagaggagttgcttctaactggagtgaggttgttagtggagttccacagggatcagtactagggcctttgctttttctaatctatattaatgatctggactctgggatagttagcaaacttgtcaaatttgcagatgatactaaataggtggctcagcagatacaatcttggcagcacaggctattcaaagagacttagataatattcagttgtgggccgacacaaaaatgtccactataatgaaactatgggaggtacagatctagatgaagtaacgcatgagaaagacctaggagtctgtggactcctcactttctccatccaagcaatgtggggaagcaataaaaaaggcaaaccgaatgctagggtatactgtcaaatgtgtagaatttagaacaagggaactgaaccttttcagc

Function

NR:

description
PREDICTED: green-sensitive opsin-2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU125 True 828 lncRNA 0.37 2 519101 558734

Neighbor

gene id symbol gene type direction distance location
AMCG00003390 NA coding downstream 278588 232621 ~ 240513 (-)
AMCG00003389 LOC108441044 coding downstream 441593 62457 ~ 77508 (-)
AMCG00003392 NA coding upstream 35541 594275 ~ 597178 (-)
AMCG00003393 NA coding upstream 60832 619566 ~ 627690 (-)
AMCG00003394 NA coding upstream 101794 660528 ~ 664276 (-)
AMCG00003399 NA coding upstream 112627 671361 ~ 802713 (-)
AMCG00003401 NA coding upstream 360578 919312 ~ 930578 (-)
G89 NA non-coding downstream 33201 485584 ~ 485900 (-)
G112 NA non-coding upstream 55457 614191 ~ 616320 (-)
G122 NA non-coding upstream 176032 734766 ~ 769986 (-)
G188 NA non-coding upstream 474926 1033660 ~ 1035682 (-)
G212 NA non-coding upstream 583504 1142238 ~ 1158563 (-)
G257 NA non-coding upstream 1029083 1587817 ~ 1588261 (-)
AMCG00003400 abracl,LOC107727609,LOC107558932,LOC107553474 other upstream 386489 945223 ~ 957196 (-)
AMCG00003423 NA other upstream 1838908 2397642 ~ 2401895 (-)
AMCG00003422 NA other upstream 1868663 2427397 ~ 2438821 (-)
G531 adck3,coq8a,LOC107602173,LOC107675039,LOC107727627 other upstream 2835923 3394657 ~ 3430272 (-)
AMCG00003444 NA other upstream 2977438 3536172 ~ 3538967 (-)

Expression


Co-expression Network