AMCG00003470


Basic Information

Item Value
gene id AMCG00003470
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 4521548 ~ 4522998 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003470
ATGCCCTATCCTAGCCTCACAGTAGTTTTAATACTATGTGGTATAGCACTCAATACTGCTAGATTGGCACTGAGATGCATTGCTCTTTTAGGGACAGATGAGCACACAGCTGCCCTGATCCACTGGCGCGGCTCTAACAGCCAGCTCTTCACGGGCAGGAGAAACGCAGCACAGAGGGGGTTTGAAGAGTTCGTCAAACAACACAATTTAGTCGGAAAAATTGAGCCCTTGAAAGTAAAAAGGAAATGGGAAAaccttaaacaaaaatacaagGATTTGAAAGCATCTAAACTTGGGATGAAAAGTGAGTGTGGAGAGAGCGCTGCTACATCCTGGAAGTGGCACGGGCCCATGGAGGAGGCTCTGGGAAAGAGGCCTAGCGTCACTCCCTCTGTCGTGGTTCCTCCTGTCCTGGTTCCTCCTGTCCTGGTTCCTCCTGTCCTGGCTGATGCAAAAAGGAGGAGGCAGGATTTTGTGACCATGCTGAAGGCATGGCAGGAGAGAGACCAAGAGAGGGAAAGAATGTATCTGGAGagggaagaaaagagagagcgagaggtgCTGgtgagagaggaaaagagggaACAGGAGTGGAGAGAGTGGGAGGAGAGAAAAGCGAGAGAACACAGGGAATGGGAGGAGAGGATACAGAGggaaaacagagagagggaagacaggagagagagagagatcagagagagggaggaaagaaGGGAACAGGAGTTCCAGGCCAGAGAGGACCGTCTCGTGTCCctgatcaaattatttttagaaaaaaaatgagttagtttgtttgttagttttgttgttttgcaatatttcaatttaagatCTATAAATGTTTACCTTTGTATATTGgtctcatttgtatttatttaagtaattacTGTAGTTGATTTTTCTGTGTTGTCACTCAAATCTGGCCtgatttgtgttatttgaaAGTGGAATACCCTGATCAATCTCAGGCTCCACAGCATCCCATGTCTTAGGCACCAGTTGTGGAGGAAGGCACCTTGGAGAAAAAGGATAATCTTAATAAAACTGCATCATATAGGCCTTTTATTTGTGTCACATTCTGCACACAGTGTTGGTGAAAGACAAAGACATGGCTCTTGATATGCAAGTTTGGATGCAGGCCTATATGGTTTGTGATCTGGAAAAAATGACATTGTATATTTGGCAGAACTATATAGTTCTATGGAGAGGACTGTCTGTtgttaacagaaaataac

Function

GO:

id name namespace
GO:0006259 DNA metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003470 True 1235 mRNA 0.44 3 4521548 4522998

Neighbor

gene id symbol gene type direction distance location
AMCG00003466 snx17 coding downstream 116906 4376892 ~ 4404642 (-)
AMCG00003462 LOC108435005,LOC103398676,LOC105028620,LOC107697317 coding downstream 197570 4299905 ~ 4323978 (-)
AMCG00003460 NA coding downstream 285896 4218169 ~ 4235652 (-)
AMCG00003464 NA coding downstream 309646 4209747 ~ 4211902 (-)
AMCG00003461 NA coding downstream 401169 4092092 ~ 4120379 (-)
AMCG00003472 NA coding upstream 24615 4547613 ~ 4553234 (-)
AMCG00003471 NA coding upstream 39403 4562401 ~ 4565560 (-)
AMCG00003477 NA coding upstream 356822 4879820 ~ 5154595 (-)
AMCG00003479 NA coding upstream 667551 5190549 ~ 5225471 (-)
AMCG00003482 NA coding upstream 834588 5357586 ~ 5358050 (-)
G748 NA non-coding downstream 531 4520815 ~ 4521017 (-)
G744 NA non-coding downstream 35522 4485607 ~ 4486026 (-)
G743 NA non-coding downstream 35983 4483516 ~ 4485565 (-)
G708 NA non-coding downstream 194698 4282149 ~ 4326850 (-)
G707 NA non-coding downstream 205264 4281825 ~ 4316284 (-)
G762 NA non-coding upstream 22900 4545898 ~ 4547298 (-)
G777 NA non-coding upstream 256848 4779846 ~ 4783376 (-)
G786 NA non-coding upstream 459021 4982019 ~ 4982220 (-)
G804 NA non-coding upstream 608469 5131467 ~ 5131701 (-)
G811 NA non-coding upstream 609702 5132700 ~ 5140245 (-)
AMCG00003459 NA other downstream 626024 3876232 ~ 3895524 (-)
AMCG00003444 NA other downstream 982581 3536172 ~ 3538967 (-)
G531 adck3,coq8a,LOC107602173,LOC107675039,LOC107727627 other downstream 1091276 3394657 ~ 3430272 (-)
AMCG00003422 NA other downstream 2082727 2427397 ~ 2438821 (-)
AMCG00003423 NA other downstream 2119653 2397642 ~ 2401895 (-)
AMCG00003476 NA other upstream 60144 4583142 ~ 4808989 (-)
AMCG00003484 NA other upstream 821072 5344070 ~ 5356468 (-)
AMCG00003550 NA other upstream 4486119 9009117 ~ 9082850 (-)
AMCG00003572 NA other upstream 5330201 9853199 ~ 9865649 (-)
AMCG00003573 NA other upstream 5351672 9874670 ~ 9878444 (-)

Expression


Co-expression Network