AMCG00003711


Basic Information

Item Value
gene id AMCG00003711
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 15726442 ~ 15751861 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003711
AAAACGTCCTGTCGGGCTGAATTTGCAAACATACGGCTTTTAACGAATGCTACTGGCAAGCAGCTTGGGACCAGCAGTGCTACCAGGCGCACGCGGCCGTGCGTTCGGAGAGCTGCTCAGGTCCTGGAAGACTTCGGATCAAAAATGTCTGCTCAGACTAGGAGAATTGGGATTATCACTTACGTTTGCAAGGAGCTCTATGAAGAAGACATCTGTGGCCATCTGCAAAGTAACAAGGAACACAATGAGATTCAGAAGCAAGCCTCTTACATCTTGCTTCTCTTCACTGCTGTCATGAGCTTCGTCTCCATCCCCCCTGCCATGCTGCTAGGGTCTTGGTCGGATCGGGCAGGACGCAAGTTTGGCATGATCCTGCCCAGTGTGGCGTCAATAGCTGCGGGCGCGGTTCTCATAGTCATCGCTGAGGTGGAGAACATAAACATTTACTGGACTGTCGCTGCTTCCATTCTTATAGGACTCTCCGGTGGTTATGTGTCAATGATCCTGAGCTGCTTCAGCTACCTGGCTGACGATACCGAGTCCTCCAACCGGACTTTACGCATGGCCATCGTGGAGTCCATGATCTTCATCGGGGGGACCGTCGGCTTTCTCCTGAGTGGGTTTTTAGTCCAGTACTTCAGCTTCACCCCCACATTCGGGGTCTTCTGCAGCTGTCATGTGCTTTCCATGCTCTATGTCCTGCTCTTGCTGAGGAACCCAGAGAGCTCCGTCGAGGGCAGGGGTATCCTCAGCGGTGATGAAGCTACACGCTCCGTCTGGAGTTACGCCAGGCTCACCTGCAGGGCGGTGTTCAGGAAACGGCCCGGACAAGACAGGCAGAAGCTCCACTTCCTCCTTCTCTGCACCTTCTTGAACaatGGCTTCTTCCTGATGGGGCTGTTTCCACTACTGATGCGCTACATTGGAGAGATGACTTTAGCTAAAGTGGGCTCCATCCTGAGGAtggtttcctttcttcttttggCTTTTTCCACAAACACATGGATGGTTTTTCTATTTGCTGTGGTCGGGGCCCCTGTTGGCGTTACCCAAACCGTAGTTCGCTCTCTATCCTCAAGAATCGTTGAGCCCGACGAACAAGGTGCCATGTTTTCCTTTTCGGCGTCGGTTGAAACATCATGCATTCTAGTGGGGGCGGTGCTGTTTAATGGACTTTATCCTCTGACCCTGGTAACTTTCCCTGGGATGTGTTTCGTTGTCATGGCTGTGTTTGCCTTCATCATCTTCATATTCATCCAG

Function

GO:

id name namespace
GO:0006814 sodium ion transport biological_process

KEGG:

id description
ko04614 Renin-angiotensin system
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003711 True 1260 mRNA 0.52 6 15726442 15751861

Neighbor

gene id symbol gene type direction distance location
AMCG00003706 NA coding upstream 328036 15394813 ~ 15398406 (+)
AMCG00003701 LOC106607895,LOC106571478 coding upstream 355576 15353478 ~ 15370866 (+)
AMCG00003705 NA coding upstream 392124 15334001 ~ 15334318 (+)
AMCG00003703 NA coding upstream 436866 15255056 ~ 15289576 (+)
AMCG00003694 NA coding upstream 570049 15144622 ~ 15156393 (+)
AMCG00003713 NA coding downstream 319691 16071552 ~ 16079315 (+)
AMCG00003715 elp3,LOC107696156,LOC107698368,LOC107599080 coding downstream 384985 16136846 ~ 16161082 (+)
AMCG00003718 NA coding downstream 455986 16207847 ~ 16210277 (+)
AMCG00003720 mcm3 coding downstream 506593 16258454 ~ 16265698 (+)
AMCG00003719 NA coding downstream 535801 16287662 ~ 16288702 (+)
G2641 NA non-coding upstream 306573 15416976 ~ 15419869 (+)
G2619 NA non-coding upstream 348805 15373195 ~ 15377637 (+)
G2571 NA non-coding upstream 596242 15128596 ~ 15130200 (+)
G2564 NA non-coding upstream 609470 15115705 ~ 15116972 (+)
G2563 NA non-coding upstream 611605 15114629 ~ 15114837 (+)
G2681 NA non-coding downstream 152622 15904483 ~ 15904820 (+)
G2698 NA non-coding downstream 280847 16032708 ~ 16032935 (+)
G2719 NA non-coding downstream 329321 16081182 ~ 16084866 (+)
G2721 NA non-coding downstream 333279 16085140 ~ 16085992 (+)
G2755 NA non-coding downstream 478074 16229935 ~ 16231498 (+)
AMCG00003702 NA other upstream 408214 15301080 ~ 15318228 (+)
AMCG00003690 NA other upstream 859684 14851752 ~ 14866758 (+)
G2440 NA other upstream 1306710 14418516 ~ 14419732 (+)
AMCG00003655 xdh other upstream 2519603 13155060 ~ 13206839 (+)
AMCG00003648 LOC106571761 other upstream 2683845 13025569 ~ 13042597 (+)
AMCG00003712 extl3,LOC106571659,LOC106608199 other downstream 273010 16024871 ~ 16039640 (+)
AMCG00003744 NA other downstream 1280709 17032570 ~ 17042594 (+)
G3047 NA other downstream 1929956 17681817 ~ 17683988 (+)
AMCG00003779 ctsb,catb,LOC107381178 other downstream 2380058 18131919 ~ 18142633 (+)
G3108 NA other downstream 2394799 18146660 ~ 18152314 (+)

Expression


Co-expression Network