Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00003816 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 19132983 ~ 19138200 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00003816 | True | 804 | mRNA | 0.52 | 5 | 19132983 | 19138200 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00003812 | tab2 | coding | upstream | 48030 | 19073792 ~ 19084953 (+) |
| AMCG00003814 | cdk19 | coding | upstream | 101236 | 19017005 ~ 19031747 (+) |
| AMCG00003813 | cdk19,LOC103371529 | coding | upstream | 129125 | 19003056 ~ 19003858 (+) |
| AMCG00003802 | rev3l,LOC107569208,LOC104962055,LOC107705450 | coding | upstream | 254448 | 18832112 ~ 18878535 (+) |
| AMCG00003805 | NA | coding | upstream | 324375 | 18807322 ~ 18808608 (+) |
| AMCG00003815 | pcmt1 | coding | downstream | 30566 | 19168766 ~ 19180512 (+) |
| AMCG00003826 | NA | coding | downstream | 310672 | 19448872 ~ 19450273 (+) |
| AMCG00003827 | NA | coding | downstream | 492270 | 19630470 ~ 19631447 (+) |
| AMCG00003832 | NA | coding | downstream | 794974 | 19933174 ~ 19943837 (+) |
| AMCG00003833 | NA | coding | downstream | 805810 | 19944010 ~ 19945017 (+) |
| G3391 | NA | non-coding | upstream | 46268 | 19084971 ~ 19086715 (+) |
| G3375 | NA | non-coding | upstream | 161859 | 18951252 ~ 18971124 (+) |
| G3373 | NA | non-coding | upstream | 182729 | 18949754 ~ 18950254 (+) |
| G3370 | NA | non-coding | upstream | 186852 | 18945582 ~ 18946131 (+) |
| G3269 | NA | non-coding | upstream | 587445 | 18544984 ~ 18545538 (+) |
| G3496 | NA | non-coding | downstream | 286807 | 19425007 ~ 19425344 (+) |
| G3534 | NA | non-coding | downstream | 574603 | 19712803 ~ 19713057 (+) |
| G3536 | NA | non-coding | downstream | 587127 | 19725327 ~ 19725709 (+) |
| G3548 | NA | non-coding | downstream | 758910 | 19897110 ~ 19897535 (+) |
| G3549 | NA | non-coding | downstream | 759385 | 19897585 ~ 19897910 (+) |
| G3108 | NA | other | upstream | 980669 | 18146660 ~ 18152314 (+) |
| AMCG00003779 | ctsb,catb,LOC107381178 | other | upstream | 990350 | 18131919 ~ 18142633 (+) |
| G3047 | NA | other | upstream | 1448995 | 17681817 ~ 17683988 (+) |
| AMCG00003744 | NA | other | upstream | 2090389 | 17032570 ~ 17042594 (+) |
| AMCG00003712 | extl3,LOC106571659,LOC106608199 | other | upstream | 3093343 | 16024871 ~ 16039640 (+) |
| AMCG00003828 | ctgf,ctgfa,moxd1,LOC106571301,LOC107683930,LOC106571350 | other | downstream | 133765 | 19271965 ~ 19397686 (+) |
| G3751 | NA | other | downstream | 2411001 | 21549201 ~ 21549533 (+) |
| G3771 | NA | other | downstream | 2607650 | 21745850 ~ 21760630 (+) |
| AMCG00003853 | NA | other | downstream | 2752323 | 21890523 ~ 21901865 (+) |
| G3799 | med23 | other | downstream | 2784436 | 21922636 ~ 21923787 (+) |
