Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00003833 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 19944010 ~ 19945017 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0004871 | obsolete signal transducer activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00003833 | True | 447 | mRNA | 0.37 | 2 | 19944010 | 19945017 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00003832 | NA | coding | upstream | 173 | 19933174 ~ 19943837 (+) |
| AMCG00003827 | NA | coding | upstream | 312563 | 19630470 ~ 19631447 (+) |
| AMCG00003826 | NA | coding | upstream | 493737 | 19448872 ~ 19450273 (+) |
| AMCG00003815 | pcmt1 | coding | upstream | 763498 | 19168766 ~ 19180512 (+) |
| AMCG00003816 | NA | coding | upstream | 805810 | 19132983 ~ 19138200 (+) |
| AMCG00003835 | NA | coding | downstream | 187756 | 20132773 ~ 20133355 (+) |
| AMCG00003836 | NA | coding | downstream | 388106 | 20333123 ~ 20333536 (+) |
| AMCG00003844 | lama2,LOC107653134 | coding | downstream | 1343443 | 21288460 ~ 21296218 (+) |
| AMCG00003843 | lama2 | coding | downstream | 1369057 | 21314074 ~ 21333224 (+) |
| AMCG00003845 | NA | coding | downstream | 1403210 | 21348227 ~ 21438679 (+) |
| G3550 | NA | non-coding | upstream | 45467 | 19898266 ~ 19898543 (+) |
| G3549 | NA | non-coding | upstream | 46100 | 19897585 ~ 19897910 (+) |
| G3548 | NA | non-coding | upstream | 46475 | 19897110 ~ 19897535 (+) |
| G3536 | NA | non-coding | upstream | 218301 | 19725327 ~ 19725709 (+) |
| G3534 | NA | non-coding | upstream | 230953 | 19712803 ~ 19713057 (+) |
| G3562 | NA | non-coding | downstream | 149021 | 20094038 ~ 20240154 (+) |
| G3563 | NA | non-coding | downstream | 294637 | 20239654 ~ 20259023 (+) |
| G3582 | NA | non-coding | downstream | 446173 | 20391190 ~ 20419930 (+) |
| G3620 | NA | non-coding | downstream | 643074 | 20588091 ~ 20588564 (+) |
| G3635 | NA | non-coding | downstream | 832042 | 20777059 ~ 20801146 (+) |
| AMCG00003828 | ctgf,ctgfa,moxd1,LOC106571301,LOC107683930,LOC106571350 | other | upstream | 546324 | 19271965 ~ 19397686 (+) |
| G3108 | NA | other | upstream | 1791696 | 18146660 ~ 18152314 (+) |
| AMCG00003779 | ctsb,catb,LOC107381178 | other | upstream | 1801377 | 18131919 ~ 18142633 (+) |
| G3047 | NA | other | upstream | 2260022 | 17681817 ~ 17683988 (+) |
| AMCG00003744 | NA | other | upstream | 2901416 | 17032570 ~ 17042594 (+) |
| G3751 | NA | other | downstream | 1604184 | 21549201 ~ 21549533 (+) |
| G3771 | NA | other | downstream | 1800833 | 21745850 ~ 21760630 (+) |
| AMCG00003853 | NA | other | downstream | 1945506 | 21890523 ~ 21901865 (+) |
| G3799 | med23 | other | downstream | 1977619 | 21922636 ~ 21923787 (+) |
| AMCG00003874 | NA | other | downstream | 2737999 | 22683016 ~ 22769227 (+) |
