AMCG00004325


Basic Information

Item Value
gene id AMCG00004325
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 42975752 ~ 43035278 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004325
atgaaaccAGAAGGCGGTCCCGTCCAAACCCTGGACCTCAGCTTCCTCTCTGCGGAGGAAGAGGCCGCGGTTCTTCACGTCCTGAACCGGGATGACAAACTGAGGAAAGAGGAAGACGGGAGGGTCAGGCAATTAAGACTGTTGGTCTCTGAGCCAAGACGACTGAAGATCCTGACAGGAGAATGGTTTGATGAGATGAAATCCAAGCGCTATGGCAAAGTCTCCACTGCGACTGATATTGTCAGATCTTCATTCAACAGGAGGAAACATCCAGCCACCCAAGGCAACCTGTTGAGTCAGGTGGGAGAGGAAGTCAGGAGTGGGCTTCAGCCAGACCAGCAGCCCCCACTGAGGAAGACCATAACGCCTGCAGGAGACACTTCATTTCTGATAGAGACTGGAAAGCTCTTTGAAGAACTGGCTAAGGATTTTGATAATGATAAAGCCTGCGTGGACCAACCTGAAAAGAGAGACAAGTTATCCTCGTCTGACACAGAATGGGATTCAAGTAATGCTCAAAGACCACTTGTGTCTCCAAGCGAAAGATCGCCTGTCTATAACTACGATGCAGCACAGTCTGACAACCTGGTGATGACACGGTCTCCCTTGGATTCCAGTGGTTCTTTAGAAGAAAGTGGAAAGCAGGGAATGCTGGAGAACTCCAAGGACTCTGAGAACATGTTGGAGTTAAGTACGCTTCTGTTCCTCACCCCAGGATTGAAGGATGAAAAGTTTCCAGGAGAGAATGTAAACAGGGAAAAGTCTAGAACCCCTTTAATTACAGATCAGGATAAACAGCAGGTCATTTCTGGGAAAACTGAGGCTCAGGACCTGAGTTATGGGGGAGAAAGACAGGAGATATCACAAGACCTTTATAGCTTTCCAGACCCCACTAAAGGTTTATGCTATGATATCGAGTTTCAGGACCGTGACACTCTCTCTGTGGGGTCATCATGGGTAGCTGAGAAGTTTTCTTCAGAGACAGCAGGTCAGAGAGTGCTGGATTCCAGTGCTATAGTGGAAGTGGAGGGAGTACCGCAAGCACCTGGCAATGACATTCAGACAAACAATCGGGACATCTCTGCAAAAGAGTTTTACTTCACACAATGGATTGCAGACCGCAAGCAGCAGGAGAGATTTCTACCGGCCAATAAACCTGAGCTGGGTTACAGTCCGAGGGCTCAGGAGAAAGAGTTCACACGTACCAGCTGCACTTTGGAGACTACACAAAAAAGCCCTCCATGTTCTTTTCCAGCCACAGTGGAGGATCCTGGCACTCCAAAAATACAGTTGTTTATGGAAGCACGTGACTCAAAAACCAAGGAAGAATTTGCGTTACCAAGTGCACATAGCACGCCGGAAAAAGACACGGAGTCCCAAGACTTCTTTAGGTTTGATCCTGGCAACACCTTCAATGAGTCTGACAGCATTCAAAGAATGCGCTCGGGAGAGGAGGAGCCAAAGATTGTCCACGAAGATTCGCCTGAACATTTGATCGACATTTCAGATGTGAAACAGGCATTGTTTTCCTTAAAAGGGGATGATTCGCAAATACCCCTTGAAGTTTTGCCAAGTCAGACTAATGAGAACATGgaacaaaataatacttttgcTTTACTTCAACCTGAGCCTATATCCAATATCTTTCAATATGATATGTCAGACATTTTCCTGAAGACGCAGCCCAGTATGCCTGCAGATGACTCTCCCACAGCAacgaaaaaaggaaaaattgatATGGTTCCTTCAATAGTAATCTTATCACCAGAATCCTCAGCACCTGTGGAAGCTGCAGAAGCAGAAGAGAGCATCAACACCCCTGCCATGGCCAGATGGGCTACGTCTGCATTGGGagAATGCGAGAGCCAGCCGGCCGTTATAAACGCGTCGTCTGAGGGCTTTGCTCCTGATCCACTCGCTGGAGCCACTACTGCGGTAGAGGTTTGGGAGGAGAGTACCGTGGACCTGGATGATGACCTCAACTCTATGTCGACCATTGGGTCTGATGCTTCGGCTAAGAAAGTAGCTCATTTGTCAAGCCTCCTGCCCGTATCAGGGCGCAGTGCGAGTATGCTGAGTTTGTACAGTGATGCCGGGGACTTTGGCGACTTTTCGGTGCAAGGAGCCATTGAGTTTGCCATCCAATACAGCGGCAAGACAGAGCTGGTCATTCTGGTGCAACAGTGTGAAGACCTCGCCATAGCAAACACAAGGAAACAGCGCACAGATccGTATGTGAAGACCTATCTCTACCCTGACCGGTCCCGTCTCAGCAAGAGAAAGACATCAATAAAGAAGAATACACTGAACCCTGTTTTTCAGGAATCGCTGAAATACAAGATTGACAAAGTGGAGCTGCAAACCAGGACTTTAAATCTGTCTGTGTGGCACAACGACTCTCTTGGTCGAAATGCCTTCCTTGGAGAAGTTGAAATAGACCTGAAGACGTGGGACTGGAAACAGGAGGATCTGGCCTGGTACAGCTTGCAGCCAAAGACTCCTGAAACTCCAGACCAACTCGGCATTCGAGGACAATTGACTGTAGCGCTGAAATATGTTCCAGCCGGATCAATGGGTGGTGCCAAACCTCTCACTGGGGAACTCCACATTTGGCTGAAAGAAGCAAGAAACCTGCAAAAGCTGAAACCCAGTGGTGTCGACTCATTTGTAAATTATGTTCTACCAGACACGAGTAAGAAGAGCAGGCAGAAGACGCGAGTGGTGAAGAAGGATCAGCACCCCGCCTACAATCACACCATGGTGTACGACGGCTTCCGCCACGACGAGATCAGAGAGGCCTGCTGTGAGCTGACCCTCTGGGACCACGACACCTTCACCAACCAGTTCCTCGGAGGGGTGCGGCTCAGCCTGGGAACAGGGAAGAGCTACGGGAAGACTGTGGACTGGATGGATTCTGCGGCTCAGGAGTCCGACCTGTGGAAGGACATGCTGGTCAACCCCTGTAAGTGGGTGGAGAAAGAGCTCCCCCTGCGGCCGTCCATGGCCAAAACAGGGTAGCATCTGCTCCAGAGAGCGAGCCTCGGTATTGTTTCACAAGCTCTGCTATTGCTCTGTATGTGCACGTGTCACTTGAATTATAGATAAGGTAAGGTTTTGTGGGGGAAAAgtagtaaaatattaattataatgaaaataatgtgtaaaaaatgcatctgataaaacaaaaaacatatgttCCACTTTTTCCACTCAATAAAGTTCTTCACAGCAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004325 True 3234 mRNA 0.48 17 42975752 43035278

Neighbor

gene id symbol gene type direction distance location
AMCG00004322 NA coding downstream 49953 42922676 ~ 42925799 (-)
AMCG00004324 NA coding downstream 55558 42914142 ~ 42920194 (-)
AMCG00004323 LOC107675226,LOC107602186,LOC105017938,LOC107716890,LOC107697125,LOC107598086 coding downstream 73869 42901035 ~ 42901883 (-)
AMCG00004319 hsf2 coding downstream 222935 42738503 ~ 42752817 (-)
AMCG00004320 fabp7,LOC108247051,LOC104945778 coding downstream 284673 42689048 ~ 42691079 (-)
AMCG00004333 NA coding upstream 431891 43467169 ~ 43485249 (-)
AMCG00004337 slc35f1,LOC107727669,LOC107678858,LOC107743307,LOC107697151 coding upstream 449991 43485269 ~ 43514436 (-)
AMCG00004334 slc35f1,LOC107697151,LOC107678858,LOC107743307,LOC107549682 coding upstream 484701 43519979 ~ 43539410 (-)
AMCG00004339 NA coding upstream 557875 43593153 ~ 43604125 (-)
AMCG00004341 NA coding upstream 570591 43605869 ~ 43608735 (-)
G7336 NA non-coding downstream 237902 42725912 ~ 42737850 (-)
G7335 NA non-coding downstream 256061 42692754 ~ 42719691 (-)
G7270 NA non-coding downstream 662634 42312919 ~ 42313118 (-)
G7268 NA non-coding downstream 710775 42264690 ~ 42264977 (-)
G7259 NA non-coding downstream 755568 42219958 ~ 42220184 (-)
G7419 NA non-coding upstream 200540 43235818 ~ 43237610 (-)
G7554 NA non-coding upstream 833185 43868463 ~ 43868706 (-)
G7580 NA non-coding upstream 1047819 44083097 ~ 44089780 (-)
G7583 NA non-coding upstream 1142368 44177646 ~ 44177988 (-)
G7585 NA non-coding upstream 1300993 44336271 ~ 44336570 (-)
AMCG00004313 NA other downstream 444746 42376726 ~ 42531006 (-)
AMCG00004302 NA other downstream 908088 42064989 ~ 42067664 (-)
G6792 hs90b,hsp90bb,hsp90ab1 other downstream 3126629 39841935 ~ 39849123 (-)
AMCG00004203 NA other downstream 5593799 37324010 ~ 37381953 (-)
AMCG00004336 NA other upstream 367675 43402953 ~ 43450255 (-)
G7608 NA other upstream 1485636 44520914 ~ 44522213 (-)
AMCG00004364 NA other upstream 1504885 44540163 ~ 44561575 (-)
AMCG00004372 LOC108423781,LOC105921217 other upstream 1587912 44623190 ~ 44712051 (-)
G7868 NA other upstream 3271648 46306926 ~ 46307319 (-)

Expression


Co-expression Network