AMCG00004376


Basic Information

Item Value
gene id AMCG00004376
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 45175332 ~ 45187413 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004376
ATGTTCATTGCACGATACCTGAGGGGAGGCCAGAGATTTGTAAGTGAGGGTGAATACCTGGAGATCACAGAAATCTCCAAAGAGCAGTCTGGGGTTTACGAATGCAGCTCTTCCAATGATGTCTCCGCTCCCAACATCAAGAAAGTCAGCGTCACGGTCAACTATCCACCTTTAATTTTCAATGCCAGAAGCCGAGGAGCTCCCCTCGGTCAGAAAGGAGTCCTTGAGTGCGAGGCATCGGCTGTTCCAGTGGCGGACTTTGAATGGTACAAAGAGGACCGAAGGCAAGTGCAGCAACAGACGCTCGCCAATGGACTTAATGGCGTTAAAATCGAGAACAAGGGCCGACAATCCATGCTGATCTTCTTCAATGTATCTGAAGAAGACTACGGAAACTACACCTGCGTGGCAATGAACACAATGGGGATAACAAATGCAAGCATAATACTGTATGGCCCGGGAGCGGTACACGACGTGAACAGGGCCGTGCTCTGCCTGCACAGCTCGCTCAGCCTACTGCTGACTATCGTTTTGCAGCACCTTCTCAAGTATTGA

Function

GO: NA

KEGG:

id description
K06773 OPCML, OBCAM; opioid binding protein/cell adhesion molecule-like

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004376 True 555 mRNA 0.50 5 45175332 45187413

Neighbor

gene id symbol gene type direction distance location
AMCG00004373 lim2.1,LOC105900331,LOC107579014 coding downstream 371174 44746710 ~ 44804158 (-)
AMCG00004370 NA coding downstream 434472 44738670 ~ 44740860 (-)
AMCG00004371 LOC106567641,LOC106603659,LOC108277187 coding downstream 482979 44684572 ~ 44692353 (-)
AMCG00004369 NA coding downstream 494666 44675825 ~ 44680666 (-)
AMCG00004359 NA coding downstream 507136 44657242 ~ 44668196 (-)
AMCG00004377 NA coding upstream 81771 45269184 ~ 45272999 (-)
AMCG00004381 panx3,LOC106603665,LOC106567648,LOC107747045,LOC107686209,LOC107579026 coding upstream 673882 45861295 ~ 45867466 (-)
AMCG00004382 pknox2,LOC107686111,LOC106567647 coding upstream 687034 45874447 ~ 45890096 (-)
AMCG00004383 NA coding upstream 711856 45899269 ~ 45900449 (-)
AMCG00004385 NA coding upstream 824122 46011535 ~ 46046524 (-)
G7714 NA non-coding downstream 31880 45139142 ~ 45143452 (-)
G7704 NA non-coding downstream 296113 44797506 ~ 44879219 (-)
G7684 NA non-coding downstream 542050 44632752 ~ 44633282 (-)
G7609 NA non-coding downstream 654514 44520175 ~ 44520818 (-)
G7587 NA non-coding downstream 766667 44408360 ~ 44408665 (-)
G7744 NA non-coding upstream 630585 45817998 ~ 45852813 (-)
G7820 NA non-coding upstream 1000093 46187506 ~ 46189689 (-)
G7866 NA non-coding upstream 1116693 46304106 ~ 46304371 (-)
G7867 NA non-coding upstream 1117101 46304514 ~ 46304760 (-)
G7869 NA non-coding upstream 1121950 46309363 ~ 46309582 (-)
AMCG00004372 LOC108423781,LOC105921217 other downstream 463281 44623190 ~ 44712051 (-)
AMCG00004364 NA other downstream 613757 44540163 ~ 44561575 (-)
G7608 NA other downstream 653119 44520914 ~ 44522213 (-)
AMCG00004336 NA other downstream 1725077 43402953 ~ 43450255 (-)
AMCG00004313 NA other downstream 2644326 42376726 ~ 42531006 (-)
G7868 NA other upstream 1119513 46306926 ~ 46307319 (-)
G7882 LOC107575789 other upstream 1280712 46468125 ~ 46468434 (-)
AMCG00004398 anc13,anapc13,LOC107756075,LOC107693524 other upstream 1695879 46883292 ~ 46887754 (-)
AMCG00004403 cadm1a,LOC107548188,LOC107715321 other upstream 1860711 47048124 ~ 47306589 (-)
AMCG00004412 zbtb16,zbtb16a,LOC107703518 other upstream 3275768 48463181 ~ 48480715 (-)

Expression


Co-expression Network