AMCG00004515


Basic Information

Item Value
gene id AMCG00004515
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 52243644 ~ 52243958 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004515
ATGGCCGTCCACATCAAGGAGGAACCCAGTCCAGGGTGTGAAAAGGGGAGGGAAACGCATCTCAAAACAGAGGACTCTGAGCTGGGAGACGTGACGGTGAAGGAGGAGACGCCCGATCTGGAACATCACCAAATTGCAGAGACTGTGGGGGAGCTGGGGAGCATCTGCGTGGTGAAACAGGAGTGCGTCAAACAGGAGACGGCGGTGGATCAGTTTCCCGGAGATCCAGAGGACGGGGCTGAGGAGAAGTGGCACGGCAGGGAGCTCAGGAACCTCTGCAGGACGGACGCTGGTGAGTATGGCATTGTCCTCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004515 True 315 mRNA 0.58 1 52243644 52243958

Neighbor

gene id symbol gene type direction distance location
AMCG00004512 ufc1,LOC107691797,LOC107574697 coding upstream 6673 52233618 ~ 52236971 (+)
AMCG00004513 NA coding upstream 31232 52197328 ~ 52212412 (+)
AMCG00004514 pou2f3,LOC107600771,LOC107664296,LOC107744320,LOC107712933 coding upstream 52333 52171286 ~ 52191311 (+)
AMCG00004511 NA coding upstream 84896 52157828 ~ 52158748 (+)
AMCG00004510 LOC103353371,LOC104918028 coding upstream 151434 52079670 ~ 52092210 (+)
AMCG00004520 NA coding downstream 4712 52248670 ~ 52249026 (+)
AMCG00004516 NA coding downstream 5180 52249138 ~ 52250367 (+)
AMCG00004527 NA coding downstream 587218 52831176 ~ 52844818 (+)
AMCG00004530 NA coding downstream 639250 52883208 ~ 52895403 (+)
AMCG00004531 timm8b,LOC107598437,LOC107717885 coding downstream 668052 52912010 ~ 52912584 (+)
G8775 NA non-coding upstream 75104 52168316 ~ 52168540 (+)
G8764 NA non-coding upstream 152353 52090885 ~ 52091291 (+)
G8658 NA non-coding upstream 580220 51645849 ~ 51663424 (+)
G8605 NA non-coding upstream 1128792 51114580 ~ 51114852 (+)
G8596 NA non-coding upstream 1272342 50970956 ~ 50971302 (+)
G8808 NA non-coding downstream 24642 52268600 ~ 52268807 (+)
G8811 NA non-coding downstream 125135 52369093 ~ 52369476 (+)
G8816 NA non-coding downstream 288771 52532729 ~ 52533018 (+)
G8817 NA non-coding downstream 309963 52553921 ~ 52554379 (+)
G8835 NA non-coding downstream 372578 52616536 ~ 52616852 (+)
AMCG00004509 NA other upstream 230014 51989353 ~ 52013630 (+)
AMCG00004501 NA other upstream 296826 51939549 ~ 51946818 (+)
G8606 NA other upstream 1128382 51114941 ~ 51115262 (+)
AMCG00004477 NA other upstream 1490212 50741388 ~ 50753432 (+)
AMCG00004463 NA other upstream 2000601 50236677 ~ 50243043 (+)
G9012 NA other downstream 939436 53183394 ~ 53183983 (+)
AMCG00004546 dixdc1,LOC107715327,LOC107693513 other downstream 1015221 53259179 ~ 53270254 (+)
G9118 NA other downstream 1359803 53603761 ~ 53607898 (+)
AMCG00004563 NA other downstream 1392081 53636039 ~ 53670522 (+)
G9128 NA other downstream 1404053 53648011 ~ 53843859 (+)

Expression


Co-expression Network