G8817


Basic Information

Item Value
gene id G8817
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 52553921 ~ 52554379 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU10900
gtagaattgagaacaagggcagtaatgttcagactgtacaatgcactagttagagctcatctggatactgtggacagttctgggctccacacttcaagaaagatgtcgctgctctagaggcagttcagaggagagcaaccagacttattccaggtctgaagggaatgtcctactgagagactgaggaactgaaccttttcaccctggaacagaggagactacgtggggacttgattcaagtcttcaaaatcatgaaaggcatcgaccacatcaaaccagaggagcttttccagatcagcagggacacacgcacccggggacacaaatggaaattgggcttcaagacattcaagacagaaaacaggagacacttcttcacacagagaggcgtcacaatctgaacaaactccccagcgatgtggctgaagagacaatttgggaacattcaaaaacagactg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU10900 True 459 lncRNA 0.36 1 52553921 52554379

Neighbor

gene id symbol gene type direction distance location
AMCG00004516 NA coding upstream 303554 52249138 ~ 52250367 (+)
AMCG00004520 NA coding upstream 304895 52248670 ~ 52249026 (+)
AMCG00004515 NA coding upstream 309963 52243644 ~ 52243958 (+)
AMCG00004512 ufc1,LOC107691797,LOC107574697 coding upstream 316950 52233618 ~ 52236971 (+)
AMCG00004513 NA coding upstream 341509 52197328 ~ 52212412 (+)
AMCG00004527 NA coding downstream 276797 52831176 ~ 52844818 (+)
AMCG00004530 NA coding downstream 328829 52883208 ~ 52895403 (+)
AMCG00004531 timm8b,LOC107598437,LOC107717885 coding downstream 357631 52912010 ~ 52912584 (+)
AMCG00004535 NA coding downstream 361269 52915648 ~ 52916301 (+)
AMCG00004538 NA coding downstream 410835 52965214 ~ 52985350 (+)
G8816 NA non-coding upstream 20903 52532729 ~ 52533018 (+)
G8811 NA non-coding upstream 184445 52369093 ~ 52369476 (+)
G8808 NA non-coding upstream 285114 52268600 ~ 52268807 (+)
G8775 NA non-coding upstream 385381 52168316 ~ 52168540 (+)
G8764 NA non-coding upstream 462630 52090885 ~ 52091291 (+)
G8835 NA non-coding downstream 62157 52616536 ~ 52616852 (+)
G8836 NA non-coding downstream 65096 52619475 ~ 52622266 (+)
G8900 NA non-coding downstream 285069 52839448 ~ 52902782 (+)
G8982 NA non-coding downstream 552365 53106744 ~ 53106997 (+)
G8987 NA non-coding downstream 562818 53117197 ~ 53119696 (+)
AMCG00004509 NA other upstream 540291 51989353 ~ 52013630 (+)
AMCG00004501 NA other upstream 607103 51939549 ~ 51946818 (+)
G8606 NA other upstream 1438659 51114941 ~ 51115262 (+)
AMCG00004477 NA other upstream 1800489 50741388 ~ 50753432 (+)
AMCG00004463 NA other upstream 2310878 50236677 ~ 50243043 (+)
G9012 NA other downstream 629015 53183394 ~ 53183983 (+)
AMCG00004546 dixdc1,LOC107715327,LOC107693513 other downstream 704800 53259179 ~ 53270254 (+)
G9118 NA other downstream 1049382 53603761 ~ 53607898 (+)
AMCG00004563 NA other downstream 1081660 53636039 ~ 53670522 (+)
G9128 NA other downstream 1093632 53648011 ~ 53843859 (+)

Expression


Co-expression Network