AMCG00004516


Basic Information

Item Value
gene id AMCG00004516
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 52249138 ~ 52250367 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004516
ATGTGGCTTCCAATTGAGGAGATCGTTCACCACTGTCCAGAAAGGGCACTGAGGATGACACCCGGAACCAGAGACTTCCACCACATCAAGTCTGTTTCATTCAATGTTGCAGACCCAGCTGCTGCTGAAATCAGCCAGAGGCAAACAAAGACCCATCCTGTTGACCTGATCACAAATGGCGACAGTGAGAGTGATGGCTGTTCTGCTACCGATCAGGAATCAGATGGCTCACAGTTGGAAAGGATGACTGTGGGACGATGGGTGCAAGTAGAATTCATAGCTGGCAAACGGTCAAAGAAGTATGTCAGAAAGATATTGAACTTGTTCAAGGAAGATGGGGAAACTCCTGGAAGTGAAAGTTACATTTGTGCGTTGCAGGTGGAGCGTACTGCACAACGACGACGTATCTTGGGTTCCAGTGAAACAAGTTATTAACGTGATGGAGGACCCTGTTATTTCATTAAGGGAACATTTCTGGTGGCCACGAATCTTGTGATATTGAATAAAATCTAATTGTGATGAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004516 True 525 mRNA 0.46 4 52249138 52250367

Neighbor

gene id symbol gene type direction distance location
AMCG00004520 NA coding upstream 112 52248670 ~ 52249026 (+)
AMCG00004515 NA coding upstream 5180 52243644 ~ 52243958 (+)
AMCG00004512 ufc1,LOC107691797,LOC107574697 coding upstream 12167 52233618 ~ 52236971 (+)
AMCG00004513 NA coding upstream 36726 52197328 ~ 52212412 (+)
AMCG00004514 pou2f3,LOC107600771,LOC107664296,LOC107744320,LOC107712933 coding upstream 57827 52171286 ~ 52191311 (+)
AMCG00004527 NA coding downstream 580809 52831176 ~ 52844818 (+)
AMCG00004530 NA coding downstream 632841 52883208 ~ 52895403 (+)
AMCG00004531 timm8b,LOC107598437,LOC107717885 coding downstream 661643 52912010 ~ 52912584 (+)
AMCG00004535 NA coding downstream 665281 52915648 ~ 52916301 (+)
AMCG00004538 NA coding downstream 714847 52965214 ~ 52985350 (+)
G8775 NA non-coding upstream 80598 52168316 ~ 52168540 (+)
G8764 NA non-coding upstream 157847 52090885 ~ 52091291 (+)
G8658 NA non-coding upstream 585714 51645849 ~ 51663424 (+)
G8605 NA non-coding upstream 1134286 51114580 ~ 51114852 (+)
G8596 NA non-coding upstream 1277836 50970956 ~ 50971302 (+)
G8808 NA non-coding downstream 18233 52268600 ~ 52268807 (+)
G8811 NA non-coding downstream 118726 52369093 ~ 52369476 (+)
G8816 NA non-coding downstream 282362 52532729 ~ 52533018 (+)
G8817 NA non-coding downstream 303554 52553921 ~ 52554379 (+)
G8835 NA non-coding downstream 366169 52616536 ~ 52616852 (+)
AMCG00004509 NA other upstream 235508 51989353 ~ 52013630 (+)
AMCG00004501 NA other upstream 302320 51939549 ~ 51946818 (+)
G8606 NA other upstream 1133876 51114941 ~ 51115262 (+)
AMCG00004477 NA other upstream 1495706 50741388 ~ 50753432 (+)
AMCG00004463 NA other upstream 2006095 50236677 ~ 50243043 (+)
G9012 NA other downstream 933027 53183394 ~ 53183983 (+)
AMCG00004546 dixdc1,LOC107715327,LOC107693513 other downstream 1008812 53259179 ~ 53270254 (+)
G9118 NA other downstream 1353394 53603761 ~ 53607898 (+)
AMCG00004563 NA other downstream 1385672 53636039 ~ 53670522 (+)
G9128 NA other downstream 1397644 53648011 ~ 53843859 (+)

Expression


Co-expression Network